Napari plugin for iteratively improving 3D instance segmentation of cells (u-net x watershed)

Last update: May 16, 2022

Related tags

Image Processing iterseg

Overview

iterseg

napari plugin for iteratively improving unet-watershed segmentation

This napari plugin was generated with Cookiecutter using @napari's cookiecutter-napari-plugin template.

Installation

You can install iterseg via pip:

pip install iterseg

To install latest development version :

pip install git+https://github.com/abigailmcgovern/iterseg.git

Contributing

Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.

License

Distributed under the terms of the BSD-3 license, "iterseg" is free and open source software

Issues

If you encounter any problems, please file an issue along with a detailed description.

Owner

Abigail McGovern

PhD Student or 18th Century porcelain cabbage art.

GitHub Repository

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