A library built upon PyTorch for building embeddings on discrete event sequences using self-supervision

Related tags

Deep Learningpytorch-lifestream
Overview

pytorch-lifestream a library built upon PyTorch for building embeddings on discrete event sequences using self-supervision. It can process terabyte-size volumes of raw events like game history events, clickstream data, purchase history or card transactions.

It supports various methods of self-supervised training, adapted for event sequences:

  • Contrastive Learning for Event Sequences (CoLES)
  • Contrastive Predictive Coding (CPC)
  • Replaced Token Detection (RTD) from ELECTRA
  • Next Sequence Prediction (NSP) from BERT
  • Sequences Order Prediction (SOP) from ALBERT

It supports several types of encoders, including Transformer and RNN. It also supports many types of self-supervised losses.

The following variants of the contrastive losses are supported:

Install from PyPi

pip install pytorch-lifestream

Install from source

# Ubuntu 20.04

sudo apt install python3.8 python3-venv
pip3 install pipenv

pipenv sync  --dev # install packages exactly as specified in Pipfile.lock
pipenv shell
pytest

Demo notebooks

  • Self-supervided training and embeddings for downstream task notebook
  • Self-supervided embeddings in CatBoost notebook
  • Self-supervided training and fine-tuning notebook
  • PySpark and Parquet for data preprocessing notebook

Experiments on public datasets

pytorch-lifestream usage experiments on several public event datasets are available in the separate repo

Comments
  • torch.stack in def collate_feature_dict

    torch.stack in def collate_feature_dict

    ptls/data_load/utils.py

    Hello!

    If the dataloader has a feature called target. And the batchsize is not a multiple of the length of the dataset, then an error pops up on the last batch: "Sizes of tensors must match except in dimension 0". Due to the use of torch.staсk when processing a feature startwith 'target'.

    opened by Ivanich-spb 11
  • Not supported multiGPU option from pytorchlightning.Trainer

    Not supported multiGPU option from pytorchlightning.Trainer

    Try to set Trainer(gpus=[0,1]), while using PtlsDataModule as data module, get such error:

    AttributeError: Can't pickle local object 'PtlsDataModule.__init__.<locals>.train_dataloader'

    opened by mazitovs 1
  • Correct seq_len for feature dict

    Correct seq_len for feature dict 

    rec = {
    'mcc': [0, 1, 2, 3],
    'target_distribution': [0.1, 0.2, 0.4, 0.1, 0.1, 0.0],
}

    How to get correct seq_len. true len: 4 possible length: 4, 6 'target_distribution' is incorrect field to get length, this is not a sequence, this is an array

    opened by ivkireev86 1
  • Save categories encodings along with model weights in demos

    Save categories encodings along with model weights in demos

    Вместе с обученной моделью необходимо сохранять обученный препроцессор и разбивку на трейн-тест. Иначе категории могут поехать и сохраненная предобученная модель станет бесполезной.

    opened by ivkireev86 1
  • Documentation index

    Documentation index

    Прототип главной страницы документации. Три секции:

    • описание моделей библиотеки
    • гайд как использовать библиотеку
    • как писать свои компоненты

    Есть краткое описание и ссылки на подробные (которые напишем потом).

    В описании модулей предложена структура библиотеки. Предполагается, что мы эти модули в ближайшее создадим и перетащим туда соответсвующие классы из библиотеки. Старые, модули, которые станут пустыми, удалим. Далее будем придерживаться схемы, описанной в этом документе.

    На ревью предлагается чекнуть предлагаемую структуру библиотеки, названия модулей ну и сам описательный текст документа.

    opened by ivkireev86 1
  • KL cyclostationarity test tools

    KL cyclostationarity test tools

    Test provides a hystogram with self-samples similarity vs. random sample similarity. Shows compatibility with CoLES.

    Think about tests for other frameworks.

    opened by ivkireev86 0
  • Repair pyspark tests

    Repair pyspark tests

    def test_dt_to_timestamp(): spark = SparkSession.builder.getOrCreate() df = spark.createDataFrame(data=[ {'dt': '1970-01-01 00:00:00'}, {'dt': '2012-01-01 12:01:16'}, {'dt': '2021-12-30 00:00:00'} ])

        df = df.withColumn('ts', dt_to_timestamp('dt'))
    ts = [rec.ts for rec in df.select('ts').collect()]

      assert ts == [0, 1325419276, 1640822400]

    E assert [-10800, 1325...6, 1640811600] == [0, 1325419276, 1640822400] E At index 0 diff: -10800 != 0 E Use -v to get more diff

    ptls_tests/test_preprocessing/test_pyspark/test_event_time.py:16: AssertionError

    def test_datetime_to_timestamp(): t = DatetimeToTimestamp(col_name_original='dt') spark = SparkSession.builder.getOrCreate() df = spark.createDataFrame(data=[ {'dt': '1970-01-01 00:00:00', 'rn': 1}, {'dt': '2012-01-01 12:01:16', 'rn': 2}, {'dt': '2021-12-30 00:00:00', 'rn': 3} ]) df = t.fit_transform(df) et = [rec.event_time for rec in df.select('event_time').collect()]

      assert et[0] == 0

    E assert -10800 == 0

    ptls_tests/test_preprocessing/test_pyspark/test_event_time.py:48: AssertionError

    opened by ikretus 0
  • docs. Development guide (for demo notebooks)

    docs. Development guide (for demo notebooks)

    • add current patterns
    • when model training start print message "model training stats, please wait. See tensorboard to track progress", use it with enable_progress=False
    documentation user feedback 
    opened by ivkireev86 0
Releases(v0.5.1)

  • v0.5.1(Dec 28, 2022)

    What's Changed

    • fixed cpc import by @ArtyomVorobev in https://github.com/dllllb/pytorch-lifestream/pull/90
    • add softmaxloss and tests by @ArtyomVorobev in https://github.com/dllllb/pytorch-lifestream/pull/87
    • MLM NSP Module by @mazitovs in https://github.com/dllllb/pytorch-lifestream/pull/88
    • fix test dropout error by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/91

    New Contributors

    • @ArtyomVorobev made their first contribution in https://github.com/dllllb/pytorch-lifestream/pull/90
    • @mazitovs made their first contribution in https://github.com/dllllb/pytorch-lifestream/pull/88

    Full Changelog: https://github.com/dllllb/pytorch-lifestream/compare/v0.5.0...v0.5.1

    Source code(tar.gz)
    Source code(zip)

  • v0.5.0(Nov 9, 2022)

    What's Changed

    • Fix metrics reset by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/72
    • Pandas preprocessing without df copy, faster preprocessing for large datasets by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/73
    • fix in supervised-sequence-to-target.ipynb by @blinovpd in https://github.com/dllllb/pytorch-lifestream/pull/74
    • ptls.nn.PBDropout by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/75
    • tanh for rnn starter by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/76
    • Auc regr metric by @ikretus in https://github.com/dllllb/pytorch-lifestream/pull/78
    • spatial dropout for NoisyEmbedding, LastMaxAvgEncoder, warning for bidir RnnEncoder by @justalge in https://github.com/dllllb/pytorch-lifestream/pull/80
    • Hparam tuning demo. hydra, optuna, tensorboard by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/81
    • tabformer by @justalge in https://github.com/dllllb/pytorch-lifestream/pull/83
    • Supervised Coles Module, trx_encoder refactoring by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/84

    New Contributors

    • @blinovpd made their first contribution in https://github.com/dllllb/pytorch-lifestream/pull/74

    Full Changelog: https://github.com/dllllb/pytorch-lifestream/compare/v0.4.0...v0.5.0

    Source code(tar.gz)
    Source code(zip)

  • v0.4.0(Jul 27, 2022)

    What's Changed

    • Seq encoder refactoring by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/29
    • regr.task ZILNLoss, RMSE, BucketAccuracy by @ikretus in https://github.com/dllllb/pytorch-lifestream/pull/36
    • lighting modules and nn layers refactoring by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/34
    • Demo colab by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/40
    • Fix drop target arrays by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/42
    • feature naming by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/43
    • Update abs_module.py by @justalge in https://github.com/dllllb/pytorch-lifestream/pull/37
    • Extended inference demo by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/45
    • fix import path by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/46
    • Experiments sync by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/50
    • Experiments sync by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/52
    • Target dist by @ikretus in https://github.com/dllllb/pytorch-lifestream/pull/58
    • Data load refactoring by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/60
    • doc update by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/62
    • doc update by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/63

    New Contributors

    • @ikretus made their first contribution in https://github.com/dllllb/pytorch-lifestream/pull/36

    Full Changelog: https://github.com/dllllb/pytorch-lifestream/compare/v0.3.0...v0.4.0

    What's Changed

    • Seq encoder refactoring by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/29
    • regr.task ZILNLoss, RMSE, BucketAccuracy by @ikretus in https://github.com/dllllb/pytorch-lifestream/pull/36
    • lighting modules and nn layers refactoring by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/34
    • Demo colab by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/40
    • Fix drop target arrays by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/42
    • feature naming by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/43
    • Update abs_module.py by @justalge in https://github.com/dllllb/pytorch-lifestream/pull/37
    • Extended inference demo by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/45
    • fix import path by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/46
    • Experiments sync by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/50
    • Experiments sync by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/52
    • Target dist by @ikretus in https://github.com/dllllb/pytorch-lifestream/pull/58
    • Data load refactoring by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/60
    • doc update by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/62
    • doc update by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/63

    New Contributors

    • @ikretus made their first contribution in https://github.com/dllllb/pytorch-lifestream/pull/36

    Full Changelog: https://github.com/dllllb/pytorch-lifestream/compare/v0.3.0...v0.4.0

    What's Changed

    • Seq encoder refactoring by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/29
    • regr.task ZILNLoss, RMSE, BucketAccuracy by @ikretus in https://github.com/dllllb/pytorch-lifestream/pull/36
    • lighting modules and nn layers refactoring by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/34
    • Demo colab by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/40
    • Fix drop target arrays by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/42
    • feature naming by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/43
    • Update abs_module.py by @justalge in https://github.com/dllllb/pytorch-lifestream/pull/37
    • Extended inference demo by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/45
    • fix import path by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/46
    • Experiments sync by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/50
    • Experiments sync by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/52
    • Target dist by @ikretus in https://github.com/dllllb/pytorch-lifestream/pull/58
    • Data load refactoring by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/60
    • doc update by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/62
    • doc update by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/63

    New Contributors

    • @ikretus made their first contribution in https://github.com/dllllb/pytorch-lifestream/pull/36

    Full Changelog: https://github.com/dllllb/pytorch-lifestream/compare/v0.3.0...v0.4.0

    Source code(tar.gz)
    Source code(zip)

  • v0.3.0(Jun 12, 2022)

    More Pythonic Core API: constructor arguments instead of config objects

    What's Changed

    • cpc params by @justalge in https://github.com/dllllb/pytorch-lifestream/pull/9
    • All modules by @justalge in https://github.com/dllllb/pytorch-lifestream/pull/15
    • Mlm pretrain by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/13
    • all encoders and get rid of get_loss by @justalge in https://github.com/dllllb/pytorch-lifestream/pull/19
    • init by @justalge in https://github.com/dllllb/pytorch-lifestream/pull/20
    • Documentation index by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/8
    • Demos api update by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/18
    • loss output correction by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/22
    • Test fixes by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/23
    • readme_demo_link by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/25
    • init by @justalge in https://github.com/dllllb/pytorch-lifestream/pull/26
    • work without logger by @justalge in https://github.com/dllllb/pytorch-lifestream/pull/7
    • trx_encoder refactoring by @ivkireev86 in https://github.com/dllllb/pytorch-lifestream/pull/28

    Full Changelog: https://github.com/dllllb/pytorch-lifestream/compare/v0.1.2...v0.3.0

    Source code(tar.gz)
    Source code(zip)
Owner
Dmitri Babaev
Dmitri Babaev
GitHub Repository
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