sfgp is a package that aggregates individual scripts and notebooks, primarily written for the basic analysis tasks of genetics and pharmacogenomics data.

Related tags

Miscellaneoussfgp
Overview

About sfgp

sfgp is a package that aggregates individual scripts and notebooks, primarily written for the basic analysis tasks of genetics and pharmacogenomics data. Analysis methodologies include methodologies related to genotype imputation, haplotyping, trans-ancestry meta-analysis, polygenic risk score modeling, multi-trait association analysis, fine-mapping, colocalization, Mendelian randomization, pleiotropy analysis, genetic and functional mapping of drug response (PK/PD)

Install from GitHub

To use rnbtn from my GitHub, you will need to properly install devtools package, and download the rnbtbn package with

# install.packages("devtools")
devtools::install_github("vsarsani/sfgp")
Owner
Vishal Sarsani
An applied statistician focused on problems in genetics and genomics – broadly in the areas of Statistical Genetics, Pharmacogenomics, and Bioinformatics.
Vishal Sarsani
When should you berserk in lichess arena tournament games?

When should you berserk in a lichess arena tournament game? 1+0 arena tournament 3+0 arena tournament Explanation For details on how I arrived at the

18 Aug 03, 2022
This repository containing cross-section cut and fill calculations using Python programming language.

cross-section This repository is containing cut and fill calculations for cross-section using Python programming language. This codes is made to calcu

3 Jun 15, 2022
Snakemake worflow to process and filter long read data from Oxford Nanopore Technologies.

Nanopore-Workflow Snakemake workflow to process and filter long read data from Oxford Nanopore Technologies. It is designed to compare whole human gen

5 May 13, 2022
A Kodi add-on for watching content hosted on PeerTube.

A Kodi add-on for watching content hosted on PeerTube. This add-on is under development so only basic features work, and you're welcome to improve it.

1 Dec 18, 2021
This is a python package to get wards, districts,cities and provinces in Zimbabwe

Zim-Places Features This is a python package that allows you to search for cities, provinces, and districts in Zimbabwe.Zimbabwe is split into eight p

RONALD KANYEPI 2 Mar 01, 2022
A joke conlang with minimal semantics

SyntaxLang Reserved Defined Words Word Function fo Terminates a noun phrase or verb phrase tu Converts an adjective block or sentence to a noun to Ter

Leo Treloar 1 Dec 07, 2021
A general-purpose wallet generator, for supported coins only

2gen A general-purpose generator for keys. Designed for all cryptocurrencies supporting the Bitcoin format of keys and addresses. Functions To enable

Vlad Usatii 1 Jan 12, 2022
A small site to list shared directories

Nebula Server Directories This site can be used to list folder and subdirectories in your server : Python It's required to have Python 3.8 or more ins

Adrien J. 1 Dec 28, 2021
ripgrep recursively searches directories for a regex pattern while respecting your gitignore

ripgrep (rg) ripgrep is a line-oriented search tool that recursively searches the current directory for a regex pattern. By default, ripgrep will resp

Andrew Gallant 35k Dec 31, 2022
Repositorio com arquivos processados da CPI da COVID para facilitar analise

cpi4all Repositorio com arquivos processados da CPI da COVID para facilitar analise Organização No site do senado é possivel encontrar a lista de todo

Breno Rodrigues Guimarães 12 Aug 16, 2021
Org agenda in the console

This Python script reads an org agenda file (i.e. a regular org file with some active dates) and displays an interactive and colored year calendar with detailed information for each day when the mous

Nicolas P. Rougier 113 Jan 03, 2023
Tutorials for on-ramping to StarkNet

Full-Stack StarkNet Repo containing the code for a short tutorial series I wrote while diving into StarkNet and learning Cairo. Aims to onramp existin

Sam Barnes 71 Dec 07, 2022
Nateve transpiler developed with python.

Adam Adam is a Nateve Programming Language transpiler developed using Python. Nateve Nateve is a new general domain programming language open source i

Nateve 7 Jan 15, 2022
An early stage integration of Hotwire Turbo with Django

Note: This is not ready for production. APIs likely to change dramatically. Please drop by our Slack channel to discuss!

Hotwire for Django 352 Jan 06, 2023
🎅🏻 Helping santa understand ✨ python ✨

☃️ Advent of code 2021 ☃️ Helping santa understand ✨ python ✨

Fluffy 2 Dec 25, 2021
Github dorking tool

gh-dork Supply a list of dorks and, optionally, one of the following: a user (-u) a file with a list of users (-uf) an organization (-org) a file with

Molly White 119 Dec 21, 2022
An extension module to make reaction based menus with disnake

disnake-ext-menus An experimental extension menu that makes working with reaction menus a bit easier. Installing python -m pip install -U disnake-ext-

1 Nov 25, 2021
A novel dual model approach for categorization of unbalanced skin lesion image classes (Presented technical paper 📃)

A novel dual model approach for categorization of unbalanced skin lesion image classes (Presented technical paper 📃)

1 Jan 19, 2022
A simple, light-weight and highly maintainable online judge system for secondary education

y³OJ a simple, light-weight and highly maintainable online judge system for secondary education 一个简单、轻量化、易于维护的、为中学信息技术学科课业教学设计的 Online Judge 系统。 Onlin

20 Oct 04, 2022
Repo with data from local elections in Portugal from 2009 to 2013

autarquicas - local elections in Portugal Repo with data from local elections in Portugal from 2009 to 2013 Objective To provide, to all, raw data fro

Jorge Gomes 6 Apr 06, 2022