A library to inspect itermediate layers of PyTorch models.

Overview

A library to inspect itermediate layers of PyTorch models.

Why?

It's often the case that we want to inspect intermediate layers of a model without modifying the code e.g. visualize attention matrices of language models, get values from an intermediate layer to feed to another layer, or applying a loss function to intermediate layers.

Install

$ pip install surgeon-pytorch

PyPI - Python Version

Usage

Inspect

Given a PyTorch model we can display all layers using get_layers:

import torch
import torch.nn as nn

from surgeon_pytorch import Inspect, get_layers

class SomeModel(nn.Module):

    def __init__(self):
        super().__init__()
        self.layer1 = nn.Linear(5, 3)
        self.layer2 = nn.Linear(3, 2)
        self.layer3 = nn.Linear(2, 1)

    def forward(self, x):
        x1 = self.layer1(x)
        x2 = self.layer2(x1)
        y = self.layer3(x2)
        return y


model = SomeModel()
print(get_layers(model)) # ['layer1', 'layer2', 'layer3']

Then we can wrap our model to be inspected using Inspect and in every forward call the new model we will also output the provided layer outputs (in second return value):

model_wrapped = Inspect(model, layer='layer2')
x = torch.rand(1, 5)
y, x2 = model_wrapped(x)
print(x2) # tensor([[-0.2726,  0.0910]], grad_fn=<AddmmBackward0>)

We can also provide a list of layers:

model_wrapped = Inspect(model, layer=['layer1', 'layer2'])
x = torch.rand(1, 5)
y, [x1, x2] = model_wrapped(x)
print(x1) # tensor([[ 0.1739,  0.3844, -0.4724]], grad_fn=<AddmmBackward0>)
print(x2) # tensor([[-0.2238,  0.0107]], grad_fn=<AddmmBackward0>)

Or a dictionary to get named outputs:

model_wrapped = Inspect(model, layer={'x1': 'layer1', 'x2': 'layer2'})
x = torch.rand(1, 5)
y, layers = model_wrapped(x)
print(layers)
"""
{
    'x1': tensor([[ 0.3707,  0.6584, -0.2970]], grad_fn=<AddmmBackward0>),
    'x2': tensor([[-0.1953, -0.3408]], grad_fn=<AddmmBackward0>)
}
"""

TODO

  • add extract function to get intermediate block
You might also like...
Ever felt tired after preprocessing the dataset, and not wanting to write any code further to train your model? Ever encountered a situation where you wanted to record the hyperparameters of the trained model and able to retrieve it afterward? Models Playground is here to help you do that. Models playground allows you to train your models right from the browser. pyhsmm - library for approximate unsupervised inference in Bayesian Hidden Markov Models (HMMs) and explicit-duration Hidden semi-Markov Models (HSMMs), focusing on the Bayesian Nonparametric extensions, the HDP-HMM and HDP-HSMM, mostly with weak-limit approximations. PyTorch implementation and pretrained models for XCiT models. See XCiT: Cross-Covariance Image Transformer
TorchGeo is a PyTorch domain library, similar to torchvision, that provides datasets, transforms, samplers, and pre-trained models specific to geospatial data.

TorchGeo is a PyTorch domain library, similar to torchvision, that provides datasets, transforms, samplers, and pre-trained models specific to geospatial data.

Pytorch library for end-to-end transformer models training and serving

Pytorch library for end-to-end transformer models training and serving

This repository provides an efficient PyTorch-based library for training deep models.

An Efficient Library for Training Deep Models This repository provides an efficient PyTorch-based library for training deep models. Installation Make

TorchMultimodal is a PyTorch library for training state-of-the-art multimodal multi-task models at scale.

TorchMultimodal (Alpha Release) Introduction TorchMultimodal is a PyTorch library for training state-of-the-art multimodal multi-task models at scale.

Objective of the repository is to learn and build machine learning models using Pytorch. 30DaysofML Using Pytorch
Objective of the repository is to learn and build machine learning models using Pytorch. 30DaysofML Using Pytorch

30 Days Of Machine Learning Using Pytorch Objective of the repository is to learn and build machine learning models using Pytorch. List of Algorithms

Pretrained SOTA Deep Learning models, callbacks and more for research and production with PyTorch Lightning and PyTorch
Pretrained SOTA Deep Learning models, callbacks and more for research and production with PyTorch Lightning and PyTorch

Pretrained SOTA Deep Learning models, callbacks and more for research and production with PyTorch Lightning and PyTorch

Comments
  • Use one backbone with different heads

    Use one backbone with different heads

    Is it possible to save the results from the backbone and apply them on the heads of the all the other models. My goal was to try to save time by avoiding repeating the backbone part. Instead of running the 3 complete models (left), only run the backbone 1 time and switch only the heads for the 3 models (right), therefore not repeating executing the backbone every time in yolov5 model.

    Thank you for the help!

    question 
    opened by brunopatricio2012 4
  • Support for DataParallel?

    Support for DataParallel?

    Hi, I noticed that the current version does not support parallel models (at least those created using torch.nn.DataParallel) since the forward hook does not differentiate between the different copies of the model and a model wrapped with Inspect will just return the intermediate features of the last copy of the parallelized model to run.

    Are you planning on fixing this issue/supporting this use case?

    opened by zimmerrol 1
Releases(0.0.4)
Owner
archinet.ai
AI Research Group
archinet.ai
Semi-supevised Semantic Segmentation with High- and Low-level Consistency

Semi-supevised Semantic Segmentation with High- and Low-level Consistency This Pytorch repository contains the code for our work Semi-supervised Seman

123 Dec 30, 2022
Personal thermal comfort models using digital twins: Preference prediction with BIM-extracted spatial-temporal proximity data from Build2Vec

Personal thermal comfort models using digital twins: Preference prediction with BIM-extracted spatial-temporal proximity data from Build2Vec This repo

Building and Urban Data Science (BUDS) Group 5 Dec 02, 2022
level1-image-classification-level1-recsys-09 created by GitHub Classroom

level1-image-classification-level1-recsys-09 ❗ 주제 설명 COVID-19 Pandemic 상황 속 마스크 착용 유무 판단 시스템 구축 마스크 착용 여부, 성별, 나이 총 세가지 기준에 따라 총 18개의 class로 구분하는 모델 ?

6 Mar 17, 2022
The Incredible PyTorch: a curated list of tutorials, papers, projects, communities and more relating to PyTorch.

This is a curated list of tutorials, projects, libraries, videos, papers, books and anything related to the incredible PyTorch. Feel free to make a pu

Ritchie Ng 9.2k Jan 02, 2023
LAnguage Model Analysis

LAMA: LAnguage Model Analysis LAMA is a probe for analyzing the factual and commonsense knowledge contained in pretrained language models. The dataset

Meta Research 960 Jan 08, 2023
Nonnegative spatial factorization for multivariate count data

Nonnegative spatial factorization for multivariate count data This repository contains supporting code to facilitate reproducible analysis. For detail

Will Townes 24 Dec 19, 2022
LocUNet is a deep learning method to localize a UE based solely on the reported signal strengths from a set of BSs.

LocUNet LocUNet is a deep learning method to localize a UE based solely on the reported signal strengths from a set of BSs. The method utilizes accura

4 Oct 05, 2022
Tooling for GANs in TensorFlow

TensorFlow-GAN (TF-GAN) TF-GAN is a lightweight library for training and evaluating Generative Adversarial Networks (GANs). Can be installed with pip

803 Dec 24, 2022
Pre-trained NFNets with 99% of the accuracy of the official paper

NFNet Pytorch Implementation This repo contains pretrained NFNet models F0-F6 with high ImageNet accuracy from the paper High-Performance Large-Scale

Benjamin Schmidt 133 Dec 09, 2022
Face Mask Detection on Image and Video using tensorflow and keras

Face-Mask-Detection Face Mask Detection on Image and Video using tensorflow and keras Train Neural Network on face-mask dataset using tensorflow and k

Nahid Ebrahimian 12 Nov 11, 2022
Alpha-Zero - Telegram Group Manager Bot Written In Python Using Pyrogram

✨ Alpha Zero Bot ✨ Telegram Group Manager Bot + Userbot Written In Python Using

1 Feb 17, 2022
Code for NeurIPS 2020 article "Contrastive learning of global and local features for medical image segmentation with limited annotations"

Contrastive learning of global and local features for medical image segmentation with limited annotations The code is for the article "Contrastive lea

Krishna Chaitanya 152 Dec 22, 2022
Underwater image enhancement

LANet Our work proposes an adaptive learning attention network (LANet) to solve the problem of color casts and low illumination in underwater images.

LiuShiBen 7 Sep 14, 2022
A embed able annotation tool for end to end cross document co-reference

CoRefi CoRefi is an emebedable web component and stand alone suite for exaughstive Within Document and Cross Document Coreference Anntoation. For a de

PythicCoder 39 Dec 12, 2022
PyTorch implementations of the paper: "Learning Independent Instance Maps for Crowd Localization"

IIM - Crowd Localization This repo is the official implementation of paper: Learning Independent Instance Maps for Crowd Localization. The code is dev

tao han 91 Nov 10, 2022
CoANet: Connectivity Attention Network for Road Extraction From Satellite Imagery

CoANet: Connectivity Attention Network for Road Extraction From Satellite Imagery This paper (CoANet) has been published in IEEE TIP 2021. This code i

Jie Mei 53 Dec 03, 2022
TensorFlow implementation of PHM (Parameterization of Hypercomplex Multiplication)

Parameterization of Hypercomplex Multiplications (PHM) This repository contains the TensorFlow implementation of PHM (Parameterization of Hypercomplex

Aston Zhang 9 Oct 26, 2022
Official Implementation of SimIPU: Simple 2D Image and 3D Point Cloud Unsupervised Pre-Training for Spatial-Aware Visual Representations

Official Implementation of SimIPU SimIPU: Simple 2D Image and 3D Point Cloud Unsupervised Pre-Training for Spatial-Aware Visual Representations Since

Zhyever 37 Dec 01, 2022
The code for our paper "AutoSF: Searching Scoring Functions for Knowledge Graph Embedding"

AutoSF The code for our paper "AutoSF: Searching Scoring Functions for Knowledge Graph Embedding" and this paper has been accepted by ICDE2020. News:

AutoML Research 64 Dec 17, 2022
Pytorch implementation of MalConv

MalConv-Pytorch A Pytorch implementation of MalConv Desciprtion This is the implementation of MalConv proposed in Malware Detection by Eating a Whole

Alexander H. Liu 58 Oct 26, 2022