Napari 3D Ortho Viewer - an ortho viewer for napari for 3D images

Overview

napari-3d-ortho-viewer

License PyPI Python Version tests codecov napari hub

Napari 3D Ortho Viewer - an ortho viewer for napari for 3D images


This napari plugin was generated with Cookiecutter using @napari's cookiecutter-napari-plugin template.

This plugin is heavily inspired by ortho-view-napari.

Check out this post on image.sc (https://forum.image.sc/t/napari-visualization-in-3-planes/57768) for more infos about multiview support in napari.

This viewer has some additional features:

  • double click to jump to specific position in all slices
  • additional 3d view of 3d stack with lines or planes indicating current position

Installation

You can install napari-3d-ortho-viewer via pip:

pip install napari-3d-ortho-viewer

To install latest development version :

pip install git+https://github.com/gatoniel/napari-3d-ortho-viewer.git

Contributing

Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.

License

Distributed under the terms of the MIT license, "napari-3d-ortho-viewer" is free and open source software

Issues

If you encounter any problems, please file an issue along with a detailed description.

Owner
niklas netter
I started studies in physics at Philipps University Marburg in April 2016. Currently I am working at Drescher Lab in the field of image analysis and biophysics.
niklas netter
Short piece of code to create a rainbow gif of gradual contours from two shapefiles

rainbow-elevation-gif Short piece of code to create a rainbow gif of gradual con

Jess Roberts 6 Jan 17, 2022
GTK and Python based, simple multiple image editor tool

System Monitoring Center GTK3 and Python3 based, simple multiple image editor tool. Note: Development of this application is not completed yet. The ap

Hakan Dündar 1 Feb 02, 2022
ProsePainter combines direct digital painting with real-time guided machine-learning based image optimization.

ProsePainter Create images by painting with words. ProsePainter combines direct digital painting with real-time guided machine-learning based image op

Morphogen 276 Dec 17, 2022
Avatar Generator Python

This is a simple avatar generator project which uses your webcam to take pictures and saves five different types of your images into your device including the original image.

Faisal Ahmed 3 Jan 23, 2022
Computer art based on joining transparent images

Computer Art There is no must in art because art is free. Introduction The following tutorial exaplains how to generate computer art based on a series

Computer Art 12 Jul 30, 2022
A QR Code encode and decode python module

A QR Code encode and decode python module

Fayas Noushad 4 Feb 10, 2022
An ascii art generator that's actually good. Does edge detection and selects the most appropriate characters.

Ascii Artist An ascii art generator that's actually good. Does edge detection and selects the most appropriate characters. Installing Installing with

18 Jan 03, 2023
Multi-view 3D reconstruction using neural rendering. Unofficial implementation of UNISURF, VolSDF, NeuS and more.

Multi-view 3D reconstruction using neural rendering. Unofficial implementation of UNISURF, VolSDF, NeuS and more.

Jianfei Guo 683 Jan 04, 2023
Qt based ebook reader

Qt based ebook reader Currently supports: pdf epub djvu fb2 mobi azw / azw3 / azw4 cbr / cbz md Contribute Paypal Bitcoin: 17jaxj26vFJNqQ2hEVerbBV5fpT

1.4k Dec 26, 2022
Generates images of calendar month tables and can paste them onto suitable photos.

📆 calendizer README Generates images of calendar month tables and can paste them onto suitable photos. A quick way to make your own calendar for prin

Sean Ryan 2 Dec 14, 2022
Python QR Code image generator

Pure python QR Code generator Generate QR codes. For a standard install (which will include pillow for generating images), run: pip install qrcode[pil

Lincoln Loop 3.5k Dec 31, 2022
Generate waves art for an image

waves-art Generate waves art for an image. Requirements: OpenCV Numpy Example Usage python waves_art.py --image_path tests/test1.jpg --patch_size 15 T

Hamza Rawal 18 Apr 04, 2022
Pixel art as well as various sets for hand crafting

Pixel art as well as various sets for hand crafting

1 Nov 09, 2021
vsketch is a Python generative art toolkit for plotters

Generative plotter art environment for Python

Antoine Beyeler 380 Dec 29, 2022
Polyfoto - Create image mosaics.

Polyfoto Create image mosaics. Showcase "Before and After Science" by Brian Eno "Scott 3" by Scott Walker Installation Clone this repository to your l

Shane Drabing 149 Dec 25, 2022
This Github Action automatically creates a GIF from a given web page to display on your project README

This Github Action automatically creates a GIF from a given web page to display on your project README

Pablo Lecolinet 28 Dec 15, 2022
Semi-hash-based Image Generator

pixel-planet Semi-hash-based Image Generator Utilizable for NFTs Generation Process Input is salted and hashed Colors (background, planet, stars) are

Bill Ni 3 Sep 01, 2022
Converting Images Into Minecraft Houses

Converting Images Into Minecraft Houses In this particular project, we turned a 2D Image into Minecraft pixel art and then scaled it in 3D such that i

Mathias Oliver Valdbjørn Jørgensen 1 Feb 02, 2022
SALaD (Semi-Automatic Landslide Detection) is a landslide mapping system

SALaD (Semi-Automatic Landslide Detection) is a landslide mapping system. SALaD utilizes Object-based Image Analysis and Random Forest to map landslides.

NASA 14 Jan 04, 2023
HTML2Image is a lightweight Python package that acts as a wrapper around the headless mode of existing web browsers to generate images from URLs and from HTML+CSS strings or files.

A package acting as a wrapper around the headless mode of existing web browsers to generate images from URLs and from HTML+CSS strings or files.

176 Jan 01, 2023