Python implementation of Principal Component Analysis

Related tags

Data Analysispca
Overview

Principal Component Analysis

Principal Component Analysis (PCA) is a dimension-reduction algorithm. The idea is to use the singular value decomposition of a data matrix to obtain the directions that explain the most of the variance in the data. This boils down to finding the eigenvalue decomposition of the covariance matrix.

Applications

A toy case is shown to illustrate the fact that PCA are the directions which explain most of the variance, in order (toycase.py).

An example where PCA can be used for dimension reduction and classification is shown for the Iris dataset (irisdataset.py).

We also show how to use PCA for image compression (imagecompression.py).

Owner
Ignacio Darago
PhD student in the Department of Mathematics at the University of Chicago
Ignacio Darago
Probabilistic Programming in Python: Bayesian Modeling and Probabilistic Machine Learning with Theano

PyMC3 is a Python package for Bayesian statistical modeling and Probabilistic Machine Learning focusing on advanced Markov chain Monte Carlo (MCMC) an

PyMC 7.2k Dec 30, 2022
Open-Domain Question-Answering for COVID-19 and Other Emergent Domains

Open-Domain Question-Answering for COVID-19 and Other Emergent Domains This repository contains the source code for an end-to-end open-domain question

7 Sep 27, 2022
CINECA molecular dynamics tutorial set

High Performance Molecular Dynamics Logging into CINECA's computer systems To logon to the M100 system use the following command from an SSH client ss

J. W. Dell 0 Mar 13, 2022
A Python package for Bayesian forecasting with object-oriented design and probabilistic models under the hood.

Disclaimer This project is stable and being incubated for long-term support. It may contain new experimental code, for which APIs are subject to chang

Uber Open Source 1.6k Dec 29, 2022
Pyspark Spotify ETL

This is my first Data Engineering project, it extracts data from the user's recently played tracks using Spotify's API, transforms data and then loads it into Postgresql using SQLAlchemy engine. Data

16 Jun 09, 2022
Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis

Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis. You write a high level configuration file specifying your in

Blue Collar Bioinformatics 917 Jan 03, 2023
Incubator for useful bioinformatics code, primarily in Python and R

Collection of useful code related to biological analysis. Much of this is discussed with examples at Blue collar bioinformatics. All code, images and

Brad Chapman 560 Jan 03, 2023
Desafio proposto pela IGTI em seu bootcamp de Cloud Data Engineer

Desafio Modulo 4 - Cloud Data Engineer Bootcamp - IGTI Objetivos Criar infraestrutura como código Utuilizando um cluster Kubernetes na Azure Ingestão

Otacilio Filho 4 Jan 23, 2022
Analyze the Gravitational wave data stored at LIGO/VIRGO observatories

Gravitational-Wave-Analysis This project showcases how to analyze the Gravitational wave data stored at LIGO/VIRGO observatories, using Python program

1 Jan 23, 2022
A collection of robust and fast processing tools for parsing and analyzing web archive data.

ChatNoir Resiliparse A collection of robust and fast processing tools for parsing and analyzing web archive data. Resiliparse is part of the ChatNoir

ChatNoir 24 Nov 29, 2022
signac-flow - manage workflows with signac

signac-flow - manage workflows with signac The signac framework helps users manage and scale file-based workflows, facilitating data reuse, sharing, a

Glotzer Group 44 Oct 14, 2022
Data collection, enhancement, and metrics calculation.

l3_data_collection Data collection, enhancement, and metrics calculation. Summary Repository containing code for QuantDAO's JDT data collection task.

Ruiwyn 3 Dec 23, 2022
Udacity - Data Analyst Nanodegree - Project 4 - Wrangle and Analyze Data

WeRateDogs Twitter Data from 2015 to 2017 Udacity - Data Analyst Nanodegree - Project 4 - Wrangle and Analyze Data Table of Contents Introduction Proj

Keenan Cooper 1 Jan 12, 2022
BasstatPL is a package for performing different tabulations and calculations for descriptive statistics.

BasstatPL is a package for performing different tabulations and calculations for descriptive statistics. It provides: Frequency table constr

Angel Chavez 1 Oct 31, 2021
Basis Set Format Converter

Basis Set Format Converter Repository for the online tool that allows you to enter a basis set in the form of text input for a variety of Quantum Chem

Manas Sharma 3 Jun 27, 2022
For making Tagtog annotation into csv dataset

tagtog_relation_extraction for making Tagtog annotation into csv dataset How to Use On Tagtog 1. Go to Project Downloads 2. Download all documents,

hyeong 4 Dec 28, 2021
A tax calculator for stocks and dividends activities.

Revolut Stocks calculator for Bulgarian National Revenue Agency Information Processing and calculating the required information about stock possession

Doino Gretchenliev 200 Oct 25, 2022
TheMachineScraper 🐱‍👤 is an Information Grabber built for Machine Analysis

TheMachineScraper 🐱‍👤 is a tool made purely for analysing machine data for any reason.

doop 5 Dec 01, 2022
WAL enables programmable waveform analysis.

This repro introcudes the Waveform Analysis Language (WAL). The initial paper on WAL will appear at ASPDAC'22 and can be downloaded here: https://www.

Institute for Complex Systems (ICS), Johannes Kepler University Linz 40 Dec 13, 2022
Karate Club: An API Oriented Open-source Python Framework for Unsupervised Learning on Graphs (CIKM 2020)

Karate Club is an unsupervised machine learning extension library for NetworkX. Please look at the Documentation, relevant Paper, Promo Video, and Ext

Benedek Rozemberczki 1.8k Jan 09, 2023