FusionNet: A deep fully residual convolutional neural network for image segmentation in connectomics

Last update: Dec 13, 2022

Related tags

Deep Learning FusionNet-Pytorch

Overview

FusionNet_Pytorch

FusionNet: A deep fully residual convolutional neural network for image segmentation in connectomics

Requirements

Pytorch 0.1.11
Python 3.5.2
wget

Download code

git clone https://github.com/GunhoChoi/FusionNet_Pytorch
cd FusionNet_Pytorch

Download Map data

wget https://people.eecs.berkeley.edu/~tinghuiz/projects/pix2pix/datasets/maps.tar.gz
tar -xzvf maps.tar.gz

Make model directory

mkdir model

Train Model

python3 main.py  -> medical image without augmentation
python3 main_augmented.py  -> map image with naive augmentation

Out of memory error -> change batch_size / img_size / out_dim

Result

Medical Image

Map Image

Original Image / Label Image / Generated Image

Related Works

FusionNet in Tensorflow by Hyungjoo Andrew Cho

Owner

Choi Gunho

Yonsei Univ. Computer Science and Business Major(2010~2017)

GitHub Repository

The official github repository for Towards Continual Knowledge Learning of Language Models

Towards Continual Knowledge Learning of Language Models This is the official github repository for Towards Continual Knowledge Learning of Language Mo

65 Jan 07, 2023

The official implementation of CVPR 2021 Paper: Improving Weakly Supervised Visual Grounding by Contrastive Knowledge Distillation.

Improving Weakly Supervised Visual Grounding by Contrastive Knowledge Distillation This repository is the official implementation of CVPR 2021 paper:

9 Nov 14, 2022

Platform-agnostic AI Framework 🔥

🇬🇧 TensorLayerX is a multi-backend AI framework, which can run on almost all operation systems and AI hardwares, and support hybrid-framework progra

171 Jan 06, 2023

RCDNet: A Model-driven Deep Neural Network for Single Image Rain Removal (CVPR2020)

RCDNet: A Model-driven Deep Neural Network for Single Image Rain Removal (CVPR2020) Hong Wang, Qi Xie, Qian Zhao, and Deyu Meng [PDF] [Supplementary M

6 Sep 27, 2022

Official Pytorch Implementation of Adversarial Instance Augmentation for Building Change Detection in Remote Sensing Images.

IAug_CDNet Official Implementation of Adversarial Instance Augmentation for Building Change Detection in Remote Sensing Images. Overview We propose a

53 Dec 02, 2022

SGPT: Multi-billion parameter models for semantic search

SGPT: Multi-billion parameter models for semantic search This repository contains code, results and pre-trained models for the paper SGPT: Multi-billi

182 Dec 29, 2022

code for generating data set ES-ImageNet with corresponding training code

es-imagenet-master code for generating data set ES-ImageNet with corresponding training code dataset generator some codes of ODG algorithm The variabl

18 Dec 25, 2022

PyTorch Implementation of Unsupervised Depth Completion with Calibrated Backprojection Layers (ORAL, ICCV 2021)

Unsupervised Depth Completion with Calibrated Backprojection Layers PyTorch implementation of Unsupervised Depth Completion with Calibrated Backprojec

80 Dec 13, 2022

Creating multimodal multitask models

Fusion Brain Challenge The English version of the document can be found here. Обновления 01.11 Мы выкладываем пример данных, аналогичных private test

43 Nov 28, 2022

Object tracking implemented with YOLOv4, DeepSort, and TensorFlow.

Object tracking implemented with YOLOv4, DeepSort, and TensorFlow. YOLOv4 is a state of the art algorithm that uses deep convolutional neural networks to perform object detections. We can take the ou

1.1k Dec 29, 2022

Fast and scalable uncertainty quantification for neural molecular property prediction, accelerated optimization, and guided virtual screening.

Evidential Deep Learning for Guided Molecular Property Prediction and Discovery Ava Soleimany*, Alexander Amini*, Samuel Goldman*, Daniela Rus, Sangee

75 Dec 15, 2022

Estimating and Exploiting the Aleatoric Uncertainty in Surface Normal Estimation

95 Jan 04, 2023

A decent AI that solves daily Wordle puzzles. Works with different websites with similar wordlists,.

Wordle-AI A decent AI that solves daily "Wordle" puzzles. Works with different websites with similar wordlists. When prompted with "Word:" enter the w

1 Feb 10, 2022

4th place solution to datafactory challenge by Intermarché.

Solution to Datafactory challenge by Intermarché. 4th place solution to datafactory challenge by Intermarché. The objective of the challenge is to pre

11 Mar 19, 2022

This implements the learning and inference/proposal algorithm described in "Learning to Propose Objects, Krähenbühl and Koltun"

Learning to propose objects This implements the learning and inference/proposal algorithm described in "Learning to Propose Objects, Krähenbühl and Ko

90 Sep 10, 2021

FusionNet: A deep fully residual convolutional neural network for image segmentation in connectomics

Related tags

Overview

FusionNet_Pytorch

Requirements

Download code

Download Map data

Make model directory

Train Model

Result

Medical Image

Map Image

Related Works

Owner

Choi Gunho

The official github repository for Towards Continual Knowledge Learning of Language Models

The official implementation of CVPR 2021 Paper: Improving Weakly Supervised Visual Grounding by Contrastive Knowledge Distillation.

Platform-agnostic AI Framework 🔥

RCDNet: A Model-driven Deep Neural Network for Single Image Rain Removal (CVPR2020)

Official Pytorch Implementation of Adversarial Instance Augmentation for Building Change Detection in Remote Sensing Images.

SGPT: Multi-billion parameter models for semantic search

code for generating data set ES-ImageNet with corresponding training code

PyTorch Implementation of Unsupervised Depth Completion with Calibrated Backprojection Layers (ORAL, ICCV 2021)

Creating multimodal multitask models

Object tracking implemented with YOLOv4, DeepSort, and TensorFlow.

Fast and scalable uncertainty quantification for neural molecular property prediction, accelerated optimization, and guided virtual screening.

Estimating and Exploiting the Aleatoric Uncertainty in Surface Normal Estimation

A decent AI that solves daily Wordle puzzles. Works with different websites with similar wordlists,.

4th place solution to datafactory challenge by Intermarché.

This implements the learning and inference/proposal algorithm described in "Learning to Propose Objects, Krähenbühl and Koltun"

Discovering Explanatory Sentences in Legal Case Decisions Using Pre-trained Language Models.

[CVPR 2021] 'Searching by Generating: Flexible and Efficient One-Shot NAS with Architecture Generator'

3D Pose Estimation for Vehicles

YOLOX Win10 Project

Repo for my Tensorflow/Keras CV experiments. Mostly revolving around the Danbooru20xx dataset