Doing bayesian data analysis - Python/PyMC3 versions of the programs described in Doing bayesian data analysis by John K. Kruschke

Overview

Doing_bayesian_data_analysis

Gitter

This repository contains the Python version of the R programs described in the great book Doing bayesian data analysis (first edition) by John K. Kruschke (AKA the puppy book).

All the code is adapted from the Kruschke's book, except hpd.py that is taken (without modifications) from the PyMC project.

The name of the programs are the same used in the book, except they begin with a number indicating the chapter. All programs are written in Python and instead of BUGS/JAGS the PyMC3 module is used.

Thanks to Brian Naughton the code is also available as an IPython notebook

Second edition

If you are interested on the PyMC3 code for the second edition of Doing bayesian data analysis, please check this Repository.

Owner
Osvaldo Martin
Osvaldo Martin
PsychoPy is an open-source package for creating experiments in behavioral science.

PsychoPy is an open-source package for creating experiments in behavioral science. It aims to provide a single package that is: precise enoug

PsychoPy 1.3k Dec 31, 2022
Read-only mirror of https://gitlab.gnome.org/GNOME/pybliographer

Pybliographer Pybliographer provides a framework for working with bibliographic databases. This software is licensed under the GPLv2. For more informa

GNOME Github Mirror 15 May 07, 2022
Animation engine for explanatory math videos

Manim is an engine for precise programatic animations, designed for creating explanatory math videos. Note, there are two versions of manim. This repo

Grant Sanderson 48.9k Jan 03, 2023
CONCEPT (COsmological N-body CodE in PyThon) is a free and open-source simulation code for cosmological structure formation

CONCEPT (COsmological N-body CodE in PyThon) is a free and open-source simulation code for cosmological structure formation. The code should run on any Linux system, from massively parallel computer

Jeppe Dakin 62 Dec 08, 2022
SeqLike - flexible biological sequence objects in Python

SeqLike - flexible biological sequence objects in Python Introduction A single object API that makes working with biological sequences in Python more

186 Dec 23, 2022
artisan: visual scope for coffee roasters

Artisan Visual scope for coffee roasters WARNING: pre-release builds may not work. Use at your own risk. Summary Artisan is a software that helps coff

Artisan – Visual Scope for Coffee Roasters 705 Jan 05, 2023
Doing bayesian data analysis - Python/PyMC3 versions of the programs described in Doing bayesian data analysis by John K. Kruschke

Doing_bayesian_data_analysis This repository contains the Python version of the R programs described in the great book Doing bayesian data analysis (f

Osvaldo Martin 851 Dec 27, 2022
Kedro is an open-source Python framework for creating reproducible, maintainable and modular data science code

A Python framework for creating reproducible, maintainable and modular data science code.

QuantumBlack Labs 7.9k Jan 01, 2023
Zipline, a Pythonic Algorithmic Trading Library

Zipline is a Pythonic algorithmic trading library. It is an event-driven system for backtesting. Zipline is currently used in production as the backte

Quantopian, Inc. 15.7k Jan 07, 2023
A simple computer program made with Python on the brachistochrone curve.

Brachistochrone-curve This is a simple computer program made with Python on the brachistochrone curve. I decided to write it after a physics lesson on

Diego Romeo 1 Dec 16, 2021
SCICO is a Python package for solving the inverse problems that arise in scientific imaging applications.

Scientific Computational Imaging COde (SCICO) SCICO is a Python package for solving the inverse problems that arise in scientific imaging applications

Los Alamos National Laboratory 37 Dec 21, 2022
AnuGA for the simulation of the shallow water equation

ANUGA Contents ANUGA What is ANUGA? Installation Documentation and Help Mailing Lists Web sites Latest source code Bug reports Developer information L

Geoscience Australia 147 Dec 14, 2022
Data intensive science for everyone.

InVesalius InVesalius generates 3D medical imaging reconstructions based on a sequence of 2D DICOM files acquired with CT or MRI equipments. InVesaliu

Galaxy Project 1k Jan 08, 2023
Karate Club: An API Oriented Open-source Python Framework for Unsupervised Learning on Graphs (CIKM 2020)

Karate Club is an unsupervised machine learning extension library for NetworkX. Please look at the Documentation, relevant Paper, Promo Video, and Ext

Benedek Rozemberczki 1.8k Dec 31, 2022
Discontinuous Galerkin finite element method (DGFEM) for Maxwell Equations

DGFEM Maxwell Equations Discontinuous Galerkin finite element method (DGFEM) for Maxwell Equations. Work in progress. Currently, the 1D Maxwell equati

Rafael de la Fuente 9 Aug 16, 2022
Wikidata scholarly profiles

Scholia is a python package and webapp for interaction with scholarly information in Wikidata. Webapp As a webapp, it currently runs from Wikimedia To

Finn Årup Nielsen 180 Dec 28, 2022
An interactive explorer for single-cell transcriptomics data

an interactive explorer for single-cell transcriptomics data cellxgene (pronounced "cell-by-gene") is an interactive data explorer for single-cell tra

Chan Zuckerberg Initiative 424 Dec 15, 2022
Statsmodels: statistical modeling and econometrics in Python

About statsmodels statsmodels is a Python package that provides a complement to scipy for statistical computations including descriptive statistics an

statsmodels 8.1k Dec 30, 2022
A mathematica expression evaluator with PokemonTypes

A simple mathematical expression evaluator that uses Pokemon types to replace symbols.

Arnav Jindal 2 Nov 14, 2021
Open Delmic Microscope Software

Odemis Odemis (Open Delmic Microscope Software) is the open-source microscopy software of Delmic B.V. Odemis is used for controlling microscopes of De

Delmic 32 Dec 14, 2022