OS-agnostic, system-level binary package manager and ecosystem

Last update: Jun 20, 2022

Overview

Conda is a cross-platform, language-agnostic binary package manager. It is the package manager used by Anaconda installations, but it may be used for other systems as well. Conda makes environments first-class citizens, making it easy to create independent environments even for C libraries. Conda is written entirely in Python, and is BSD licensed open source.

Conda is enhanced by organizations, tools, and repositories created and managed by the amazing members of the conda community. Some of them can be found here.

Installation

Conda is a part of the Anaconda Distribution. Use Miniconda to bootstrap a minimal installation that only includes conda and its dependencies.

Getting Started

If you install Anaconda, you will already have hundreds of packages installed. You can see what packages are installed by running

$ conda list

to see all the packages that are available, use

$ conda search

and to install a package, use

$ conda install <package-name>

The real power of conda comes from its ability to manage environments. In conda, an environment can be thought of as a completely separate installation. Conda installs packages into environments efficiently using hard links by default when it is possible, so environments are space efficient, and take seconds to create.

The default environment, which conda itself is installed into is called base. To create another environment, use the conda create command. For instance, to create an environment with the IPython notebook and NumPy 1.6, which is older than the version that comes with Anaconda by default, you would run

$ conda create -n numpy16 ipython-notebook numpy=1.6

This creates an environment called numpy16 with the latest version of the IPython notebook, NumPy 1.6, and their dependencies.

We can now activate this environment, use

# On Linux and Mac OS X
$ source activate numpy16

# On Windows
> activate numpy16

This puts the bin directory of the numpy16 environment in the front of the PATH, and sets it as the default environment for all subsequent conda commands.

To go back to the base environment, use

# On Linux and Mac OS X
$ source deactivate

# On Windows
> deactivate

Building Your Own Packages

You can easily build your own packages for conda, and upload them to anaconda.org, a free service for hosting packages for conda, as well as other package managers. To build a package, create a recipe. Package building documentation is available here. See https://github.com/AnacondaRecipes for the recipes that make up the Anaconda Distribution and defaults channel. Conda-forge and Bioconda are community-driven conda-based distributions.

To upload to anaconda.org, create an account. Then, install the anaconda-client and login

$ conda install anaconda-client
$ anaconda login

Then, after you build your recipe

$ conda build <recipe-dir>

you will be prompted to upload to anaconda.org.

To add your anaconda.org channel, or the channel of others to conda so that conda install will find and install their packages, run

$ conda config --add channels https://conda.anaconda.org/username

(replacing username with the user name of the person whose channel you want to add).

Getting Help

The documentation for conda is at https://conda.io/en/latest/. You can subscribe to the conda mailing list. The source code and issue tracker for conda are on GitHub.

Contributing

Contributions to conda are welcome. See the contributing documentation for instructions on setting up a development environment.

Issues

conda extremely slow

I'm submitting a...

[ ] bug report
[x] feature request

Current Behavior

conda operations appear to be particularly slow, this seems to have got worse as the versions have progressed.

Steps to Reproduce

time conda install -c simplistix picky-conda=2.0.2

The above currently takes 30-40s into an existing environment.

Expected Behavior

Hopefully done and dusted within a second or two.

Environment Information

`conda info`

$ conda info

     active environment : myproj
    active env location : /Users/chris/anaconda2/envs/moneybox
            shell level : 1
       user config file : /Users/chris/.condarc
 populated config files : /Users/chris/.condarc
          conda version : 4.5.1
    conda-build version : 3.8.0
         python version : 2.7.14.final.0
       base environment : /Users/chris/anaconda2  (writable)
           channel URLs : https://repo.anaconda.com/pkgs/main/osx-64
                          https://repo.anaconda.com/pkgs/main/noarch
                          https://repo.anaconda.com/pkgs/free/osx-64
                          https://repo.anaconda.com/pkgs/free/noarch
                          https://repo.anaconda.com/pkgs/r/osx-64
                          https://repo.anaconda.com/pkgs/r/noarch
                          https://repo.anaconda.com/pkgs/pro/osx-64
                          https://repo.anaconda.com/pkgs/pro/noarch
                          https://conda.anaconda.org/conda-forge/osx-64
                          https://conda.anaconda.org/conda-forge/noarch
          package cache : /Users/chris/anaconda2/pkgs
                          /Users/chris/.conda/pkgs
       envs directories : /Users/chris/anaconda2/envs
                          /Users/chris/.conda/envs
               platform : osx-64
             user-agent : conda/4.5.1 requests/2.18.4 CPython/2.7.14 Darwin/17.5.0 OSX/10.13.4
                UID:GID : 501:20
             netrc file : None
           offline mode : False

type::feature solver source::community

opened by cjw296 149

CondaHTTPError: HTTP 000 CONNECTION FAILED for url Elapsed: -

Hello i am facing this issue since few day. I read few posts and tried to workaround but nothing seems to work. Can someone please help me fix this. I am unable to update anything . I am copy pasting the error i get:

(base) C:\Users\avnis>conda update conda Collecting package metadata (current_repodata.json): failed

CondaHTTPError: HTTP 000 CONNECTION FAILED for url https://repo.anaconda.com/pkgs/main/win-64/current_repodata.json Elapsed: -

An HTTP error occurred when trying to retrieve this URL. HTTP errors are often intermittent, and a simple retry will get you on your way.

If your current network has https://www.anaconda.com blocked, please file a support request with your network engineering team.

ConnectTimeout(MaxRetryError("HTTPSConnectionPool(host='repo.anaconda.com', port=443): Max retries exceeded with url: /pkgs/main/win-64/current_repodata.json (Caused by ConnectTimeoutError(<urllib3.connection.VerifiedHTTPSConnection object at 0x000002D74E9F1748>, 'Connection to repo.anaconda.com timed out. (connect timeout=9.15)'))"))
type::support source::community stale stale::closed

opened by 12avnisharma 129
Elapsed: -"">

Any Package Results in "CondaHTTPError: HTTP 000 CONNECTION FAILED for url Elapsed: -"

Hi there,

Whatever package I try to install, I seem to get this error:

conda install -c anaconda accelerate Fetching package metadata ... CondaHTTPError: HTTP 000 CONNECTION FAILED for url https://conda.anaconda.org/anaconda/linux-64/repodata.json Elapsed: -

An HTTP error occurred when trying to retrieve this URL. HTTP errors are often intermittent, and a simple retry will get you on your way. SSLError(SSLError("Can't connect to HTTPS URL because the SSL module is not available.",),)

On another note, I have (un-/re-)installed many packages (such as curl) recently, could that be the issue? Must I reinstall anaconda? Thanks
type::support source::community

opened by Chaztikov 114
NotWritableError: The current user does not have write permissions to a required path.
Conda is seriously confused about permissions. Right after I installed Anaconda from Anaconda3-5.1.0-Linux-x86_64.sh into my home (/home/marek/anaconda3) and added

. /home/marek/anaconda3/etc/profile.d/conda.sh

into my ~/.zshrc and started new shell, I tried to create new environment:

% conda create --name condatest python=3 Solving environment: failed NotWritableError: The current user does not have write permissions to a required path. path: /home/marek/.conda/pkgs/urls.txt uid: 1009 gid: 1009 If you feel that permissions on this path are set incorrectly, you can manually change them by executing $ sudo chown 1009:1009 /home/marek/.conda/pkgs/urls.txt In general, it's not advisable to use 'sudo conda'.

My user and group ids are 1009.

~/.conda directory didn't exist before I run the command above

~/.conda directory DID exist after I run the command above, though it was empty

% touch ~/.conda/foo works

This happens on latest ArchLinux, latest Ubuntu (bionic) and with both bash and zsh as shell...
opened by marak8 94
Recent conda changes breaking Travis
Not 100% sure that this is a conda issue, but it looks like changes in .27 are breaking Travis builds that use extension modules.

In particular, the compiler is identified as

compiler: x86_64-conda_cos6-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -fwrapv -O2 -Wall -Wstrict-prototypes -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -pipe -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -pipe -fPIC

Not sure why conda would be in the compiler.

And example of a failed build can be see https://travis-ci.org/statsmodels/statsmodels/builds/280537305
locked
opened by bashtage 83
Add generic support for bourne- and c-based shells
With these changes conda's activate/deactivate now support bash/zsh/tcsh/csh.

The scripts assume that activate*, deactivate*, and conda* can be found on the user's $PATH as opposed to detecting the $_SCRIPT_LOCATION as was done previously. This change is necessary to support tcsh/csh where the script location cannot be reliably detected when sourced.

bash/zsh:

source activate [ENVNAME] source deactivate

tcsh/csh (since the which command doesn't search the user $PATH in tcsh/csh):

source \`which activate\` [ENVNAME] source \`which deactivate\`

The old activate script has effectively been renamed as activate.sh. Likewise with the old deactivate script. They contain the same content but has been slightly edited to match the look and feel of the *.csh scripts that have been introduced.

It may also make sense to encourage users to create aliases when they install Conda.

bash/zsh:

alias activate="source activate" alias deactivate="source deactivate"

tcsh/csh:

alias activate "source \`which \activate\`" alias deactivate "source \`which \deactivate\`"
type::feature cli locked
opened by kenodegard 82

python 2.7.10-0 fails to create virtualenv with Symbol not found: __PyErr_ReplaceException

This morning I wanted to create a virtualenv on Mac OS X where my default python is now anaconda, so I needed to install virtualenv:

$ conda install virtualenv
Fetching package metadata: ....
Solving package specifications: .
Package plan for installation in environment /Users/cwithers/anaconda:

The following packages will be downloaded:

    package                    |            build
    ---------------------------|-----------------
    conda-env-2.2.1            |           py27_0          21 KB
    python-2.7.10              |                0        11.4 MB
    requests-2.7.0             |           py27_0         594 KB
    setuptools-17.0            |           py27_0         341 KB
    conda-3.13.0               |           py27_0         168 KB
    pip-7.0.3                  |           py27_0         1.4 MB
    virtualenv-13.0.1          |           py27_0         1.6 MB
    ------------------------------------------------------------
                                           Total:        15.5 MB

The following NEW packages will be INSTALLED:

    virtualenv: 13.0.1-py27_0

The following packages will be UPDATED:

    conda:      3.11.0-py27_0 --> 3.13.0-py27_0
    conda-env:  2.1.4-py27_0  --> 2.2.1-py27_0 
    pip:        6.1.1-py27_0  --> 7.0.3-py27_0 
    python:     2.7.9-1       --> 2.7.10-0     
    requests:   2.6.2-py27_0  --> 2.7.0-py27_0 
    setuptools: 15.1-py27_1   --> 17.0-py27_0

However, now when I try to create the env I get this error:

$ virtualenv ve
New python executable in ve/bin/python
Installing setuptools, pip, wheel...
  Complete output from command /Users/cwithers/vcs/x/ve/bin/python -c "import sys, pip; sys...d\"] + sys.argv[1:]))" setuptools pip wheel:
  Traceback (most recent call last):
  File "<string>", line 1, in <module>
  File "/Users/cwithers/anaconda/lib/python2.7/site-packages/virtualenv_support/pip-7.0.1-py2.py3-none-any.whl/pip/__init__.py", line 13, in <module>
  File "/Users/cwithers/anaconda/lib/python2.7/site-packages/virtualenv_support/pip-7.0.1-py2.py3-none-any.whl/pip/utils/__init__.py", line 15, in <module>
  File "/Users/cwithers/anaconda/lib/python2.7/zipfile.py", line 6, in <module>
    import io
  File "/Users/cwithers/anaconda/lib/python2.7/io.py", line 51, in <module>
    import _io
ImportError: dlopen(/Users/cwithers/vcs/x/ve/lib/python2.7/lib-dynload/_io.so, 2): Symbol not found: __PyErr_ReplaceException
  Referenced from: /Users/cwithers/vcs/x/ve/lib/python2.7/lib-dynload/_io.so
  Expected in: dynamic lookup

Downgrading to Python 2.7.9-1 made this problem go away. It looks like I'm not the only one experiencing this:

http://stackoverflow.com/questions/30674338/upgrade-to-python-2-7-10-target-wsgi-script-cannot-be-loaded-as-python-module

locked

opened by cjw296 76

Added basic activate/deactivate, conda activate/deactivate/ls for fish shell
This is a basic take on fish-compatible activate and deactivate commands. This also adds conda activate, conda deactivate and conda ls commands for convenience.

Autocompletions and event handlers may follow later; the basics seem to work fine for now.

Usage:

source (conda info --root)/bin/conda.fish
cli locked
opened by aldanor 76
Add `conda run` command, more `--json` flags
$ conda launch -h usage: conda launch [-h] [COMMAND] Launches an application installed with Conda. positional arguments: COMMAND package to launch optional arguments: -h, --help show this help message and exit $ conda launch ipython-qtconsole Fetching package metadata: ... Started app. Some apps may take a while to finish loading. $ conda launch ipython-qtconsole --json { "fn": "ipython-qtconsole-2.1.0-py34_0.tar.bz2" } $ conda launch conda Fetching package metadata: ... Error: Not an application: conda-3.5.5-py34_0.tar.bz2 $ conda launch conda --json { "error": "Not an application: conda-3.5.5-py34_0.tar.bz2" } $ conda launch nonexistent_package Fetching package metadata: ... Error: App nonexistent_package not installed. $ conda launch nonexistent_package --json { "error": "App nonexistent_package not installed." } $ conda launch ipython-qtconsole-2.1.0-py34_0.tar.bz2 Started app. Some apps may take a while to finish loading. $ conda launch ipython-qtconsole-2.1.0-py34_0.tar.bz2 --json { "fn": "ipython-qtconsole-2.1.0-py34_0.tar.bz2" }

TODO:

[x] conda info package1 package2 ... --json

[x] conda list --json (fixes #713)

[x] conda info ipython-qtconsole-2.1.0-py34_0.tar.bz2 [--json]?(retrieve metadata such as install status, features,...)

[x] conda search --json

~~[ ] create~~

[x] install (fixes #773)

[x] install when a hint is generated

[x] update

[x] update --json with No packages found matching error

[x] remove

[x] config

[x] clean

[x] Handle progressbars (requires parsing by client; uses JSON messages flushed to stdout separated by nulls)

[x] Add tests

[ ] Some way to get all info from conda.config (perhaps conda info --json should include that data)

[x] Windows has additional printing in install.py that needs to be handled

[x] Handle locking with --json

[x] Printing in resolve.py

[x] More informative JSON errors? (e.g. provide an error code/exception type to make it easier for APIs to raise an appropriate exception)

[x] Handle HTTP errors in JSON

[x] Resolve this launch vs IPython Notebook conda-launch

~~[ ] Figure out how to trap yaml ImportError in main_config~~ can't be trapped - conda won't start at all.

[x] conda run with packages not in the index (e.g. conda-ui)

locked
opened by lidavidm 73
CondaHTTPError: HTTP 000 Connection Failed during conda install with new 2018.12 Anaconda3 Windows install
First off, I am not behind a firewall. I am on a home broadband network. Using a Windows 10 Pro, Version 10.0.17134 Build 17134 HP machine.

Unable to install any packages with Conda command lines or the Anaconda Navigator. Anaconda Navigator never completes install. Conda returns the following error messages. C:\Users\owen>conda install geopandas Solving environment: failed

CondaHTTPError: HTTP 000 CONNECTION FAILED for url https://repo.anaconda.com/pkgs/main/win-64/repodata.json.bz2 Elapsed: -

An HTTP error occurred when trying to retrieve this URL. HTTP errors are often intermittent, and a simple retry will get you on your way.

If your current network has https://www.anaconda.com blocked, please file a support request with your network engineering team.

SSLError(MaxRetryError('HTTPSConnectionPool(host='repo.anaconda.com', port=443): Max retries exceeded with url: /pkgs/main/win-64/repodata.json.bz2 (Caused by SSLError("Can't connect to HTTPS URL because the SSL module is not available."))'))

Steps to Reproduce
I upgraded from Anaconda3-5.0.1-Windowsx86_64 to Anaconda3-2018.12-Windows-x86_64
Conda works once. I installed Cartopy package. Then I tried to install Geopandas, and error message appeared. I tried researching problem, but all old post dealt with issue behind a firewall. I uninstalled Anaconda and reinstalled. Same issue appeared in same order of events as previously. conda install geopandas

## Expected Behavior  Old version of Anaconda never had SSL issues during conda installs. ## Environment Information <details open><summary><code>`conda info`</code></summary><p>  conda version 4.5.12
opened by mygethub-99 66

conda update permission error

I update the conda version on my laptop to 4.2.6 and I have now an error to update one of my environment related to writing permission. Conda is trying to save package in the main conda environement not taking into account that I am in a specific environment.

Here the log:

Traceback (most recent call last):
  File "/opt/miniconda/lib/python3.4/site-packages/conda/fetch.py", line 417, in download
    with open(pp, 'wb') as fo:
PermissionError: [Errno 13] Permission denied: '/opt/miniconda/pkgs/pytz-2016.6.1-py35_0.tar.bz2.part'

During handling of the above exception, another exception occurred:

Traceback (most recent call last):
  File "/opt/miniconda/lib/python3.4/site-packages/conda/cli/install.py", line 405, in install
    execute_actions(actions, index, verbose=not context.quiet)
  File "/opt/miniconda/lib/python3.4/site-packages/conda/plan.py", line 643, in execute_actions
    inst.execute_instructions(plan, index, verbose)
  File "/opt/miniconda/lib/python3.4/site-packages/conda/instructions.py", line 132, in execute_instructions
    cmd(state, arg)
  File "/opt/miniconda/lib/python3.4/site-packages/conda/instructions.py", line 47, in FETCH_CMD
    fetch_pkg(state['index'][arg + '.tar.bz2'])
  File "/opt/miniconda/lib/python3.4/site-packages/conda/fetch.py", line 336, in fetch_pkg
    download(url, path, session=session, md5=info['md5'], urlstxt=True)
  File "/opt/miniconda/lib/python3.4/site-packages/conda/fetch.py", line 438, in download
    raise CondaRuntimeError("Could not open %r for writing (%s)." % (pp, e))
conda.exceptions.CondaRuntimeError: Runtime error: Could not open '/opt/miniconda/pkgs/pytz-2016.6.1-py35_0.tar.bz2.part' for writing ([Errno 13] Permission denied: '/opt/miniconda/pkgs/pytz-2016.6.1-py35_0.tar.bz2.part').

During handling of the above exception, another exception occurred:

Traceback (most recent call last):
  File "/opt/miniconda/lib/python3.4/site-packages/conda/exceptions.py", line 472, in conda_exception_handler
    return_value = func(*args, **kwargs)
  File "/opt/miniconda/lib/python3.4/site-packages/conda/cli/main.py", line 144, in _main
    exit_code = args.func(args, p)
  File "/opt/miniconda/lib/python3.4/site-packages/conda/cli/main_update.py", line 65, in execute
    install(args, parser, 'update')
  File "/opt/miniconda/lib/python3.4/site-packages/conda/cli/install.py", line 420, in install
    raise CondaRuntimeError('RuntimeError: %s' % e)
conda.exceptions.CondaRuntimeError: Runtime error: RuntimeError: Runtime error: Could not open '/opt/miniconda/pkgs/pytz-2016.6.1-py35_0.tar.bz2.part' for writing ([Errno 13] Permission denied: '/opt/miniconda/pkgs/pytz-2016.6.1-py35_0.tar.bz2.part').

type::bug locked

opened by gruel 64

Getting 502 Bad Gateway error in conda install

Checklist

[X] I added a descriptive title
[X] I searched for other issues and couldn't find a solution or duplication
[X] I already searched in Google and didn't find any good information or help
[X] I looked at the docs and didn't see anything to help

What happened?

I ran this command conda install pytorch torchvision torchaudio cpuonly -c pytorch

And I am getting this error for more than 50 times now


CondaHTTPError: HTTP 502 BAD GATEWAY for url <https://conda.anaconda.org/pytorch/noarch/repodata.json>
Elapsed: 00:00.198441
CF-RAY: 71baf03c2f95396b-MAA

A remote server error occurred when trying to retrieve this URL.

A 500-type error (e.g. 500, 501, 502, 503, etc.) indicates the server failed to
fulfill a valid request.  The problem may be spurious, and will resolve itself if you
try your request again.  If the problem persists, consider notifying the maintainer
of the remote server.```


### Conda info

```shell
active environment : base
    active env location : /home/rashid/anaconda3
            shell level : 1
       user config file : /home/rashid/.condarc
 populated config files : /home/rashid/.condarc
          conda version : 4.12.0
    conda-build version : 3.21.8
         python version : 3.9.12.final.0
       virtual packages : __linux=5.15.0=0
                          __glibc=2.35=0
                          __unix=0=0
                          __archspec=1=x86_64
       base environment : /home/rashid/anaconda3  (writable)
      conda av data dir : /home/rashid/anaconda3/etc/conda
  conda av metadata url : None
           channel URLs : https://repo.anaconda.com/pkgs/main/linux-64
                          https://repo.anaconda.com/pkgs/main/noarch
                          https://repo.anaconda.com/pkgs/r/linux-64
                          https://repo.anaconda.com/pkgs/r/noarch
          package cache : /home/rashid/anaconda3/pkgs
                          /home/rashid/.conda/pkgs
       envs directories : /home/rashid/anaconda3/envs
                          /home/rashid/.conda/envs
               platform : linux-64
             user-agent : conda/4.12.0 requests/2.27.1 CPython/3.9.12 Linux/5.15.0-37-generic ubuntu/22.04 glibc/2.35
                UID:GID : 1000:1000
             netrc file : /home/rashid/.netrc
           offline mode : False

Conda config

==> /home/rashid/.condarc <==
auto_activate_base: True

Conda list

# packages in environment at /home/rashid/anaconda3:
#
# Name                    Version                   Build  Channel
_ipyw_jlab_nb_ext_conf    0.1.0            py39h06a4308_1    defaults
_libgcc_mutex             0.1                        main    defaults
_openmp_mutex             4.5                       1_gnu    defaults
aiohttp                   3.8.1            py39h7f8727e_1    defaults
aiosignal                 1.2.0              pyhd3eb1b0_0    defaults
alabaster                 0.7.12             pyhd3eb1b0_0    defaults
anaconda                  2022.05                  py39_0    defaults
anaconda-client           1.9.0            py39h06a4308_0    defaults
anaconda-navigator        2.1.4            py39h06a4308_0    defaults
anaconda-project          0.10.2             pyhd3eb1b0_0    defaults
anyio                     3.5.0            py39h06a4308_0    defaults
appdirs                   1.4.4              pyhd3eb1b0_0    defaults
argon2-cffi               21.3.0             pyhd3eb1b0_0    defaults
argon2-cffi-bindings      21.2.0           py39h7f8727e_0    defaults
arrow                     1.2.2              pyhd3eb1b0_0    defaults
astroid                   2.6.6            py39h06a4308_0    defaults
astropy                   5.0.4            py39hce1f21e_0    defaults
asttokens                 2.0.5              pyhd3eb1b0_0    defaults
async-timeout             4.0.1              pyhd3eb1b0_0    defaults
atomicwrites              1.4.0                      py_0    defaults
attrs                     21.4.0             pyhd3eb1b0_0    defaults
automat                   20.2.0                     py_0    defaults
autopep8                  1.6.0              pyhd3eb1b0_0    defaults
babel                     2.9.1              pyhd3eb1b0_0    defaults
backcall                  0.2.0              pyhd3eb1b0_0    defaults
backports                 1.1                pyhd3eb1b0_0    defaults
backports.functools_lru_cache 1.6.4              pyhd3eb1b0_0    defaults
backports.tempfile        1.0                pyhd3eb1b0_1    defaults
backports.weakref         1.0.post1                  py_1    defaults
bcrypt                    3.2.0            py39he8ac12f_0    defaults
beautifulsoup4            4.11.1           py39h06a4308_0    defaults
binaryornot               0.4.4              pyhd3eb1b0_1    defaults
bitarray                  2.4.1            py39h7f8727e_0    defaults
bkcharts                  0.2              py39h06a4308_0    defaults
black                     19.10b0                    py_0    defaults
blas                      1.0                         mkl    defaults
bleach                    4.1.0              pyhd3eb1b0_0    defaults
blosc                     1.21.0               h8c45485_0    defaults
bokeh                     2.4.2            py39h06a4308_0    defaults
boto3                     1.21.32            pyhd3eb1b0_0    defaults
botocore                  1.24.32            pyhd3eb1b0_0    defaults
bottleneck                1.3.4            py39hce1f21e_0    defaults
brotli                    1.0.9                he6710b0_2    defaults
brotlipy                  0.7.0           py39h27cfd23_1003    defaults
brunsli                   0.1                  h2531618_0    defaults
bzip2                     1.0.8                h7b6447c_0    defaults
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wcwidth                   0.2.5              pyhd3eb1b0_0    defaults
webencodings              0.5.1            py39h06a4308_1    defaults
websocket-client          0.58.0           py39h06a4308_4    defaults
werkzeug                  2.0.3              pyhd3eb1b0_0    defaults
wget                      1.21.3               h0b77cf5_0    defaults
wheel                     0.37.1             pyhd3eb1b0_0    defaults
widgetsnbextension        3.5.2            py39h06a4308_0    defaults
wrapt                     1.12.1           py39he8ac12f_1    defaults
wurlitzer                 3.0.2            py39h06a4308_0    defaults
xarray                    0.20.1             pyhd3eb1b0_1    defaults
xlrd                      2.0.1              pyhd3eb1b0_0    defaults
xlsxwriter                3.0.3              pyhd3eb1b0_0    defaults
xz                        5.2.5                h7b6447c_0    defaults
yaml                      0.2.5                h7b6447c_0    defaults
yapf                      0.31.0             pyhd3eb1b0_0    defaults
yarl                      1.6.3            py39h27cfd23_0    defaults
zeromq                    4.3.4                h2531618_0    defaults
zfp                       0.5.5                h295c915_6    defaults
zict                      2.0.0              pyhd3eb1b0_0    defaults
zipp                      3.7.0              pyhd3eb1b0_0    defaults
zlib                      1.2.12               h7f8727e_2    defaults
zope                      1.0              py39h06a4308_1    defaults
zope.interface            5.4.0            py39h7f8727e_0    defaults
zstd                      1.4.9                haebb681_0    defaults

Additional Context

No response

type::bug

opened by m3rashid 0

missing activate.d and deactivate.d inside envs

Checklist

[X] I added a descriptive title
[X] I searched for other issues and couldn't find a solution or duplication
[X] I already searched in Google and didn't find any good information or help
[X] I looked at the docs and didn't see anything to help

What happened?

>>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<

Traceback (most recent call last):
  File "/home/dstest2/miniconda2/lib/python2.7/site-packages/conda/cli/main.py", line 140, in main
    return activator_main()
  File "/home/dstest2/miniconda2/lib/python2.7/site-packages/conda/activate.py", line 1207, in main
    print(activator.execute(), end='')
  File "/home/dstest2/miniconda2/lib/python2.7/site-packages/conda/activate.py", line 178, in execute
    return getattr(self, self.command)()
  File "/home/dstest2/miniconda2/lib/python2.7/site-packages/conda/activate.py", line 152, in activate
    builder_result = self.build_activate(self.env_name_or_prefix)
  File "/home/dstest2/miniconda2/lib/python2.7/site-packages/conda/activate.py", line 297, in build_activate
    return self._build_activate_stack(env_name_or_prefix, False)
  File "/home/dstest2/miniconda2/lib/python2.7/site-packages/conda/activate.py", line 321, in _build_activate_stack
    activate_scripts = self._get_activate_scripts(prefix)
  File "/home/dstest2/miniconda2/lib/python2.7/site-packages/conda/activate.py", line 705, in _get_activate_scripts
    p for p in paths if p[se_len:] == _script_extension
  File "/home/dstest2/miniconda2/lib/python2.7/site-packages/conda/activate.py", line 705, in <genexpr>
    p for p in paths if p[se_len:] == _script_extension
  File "/home/dstest2/miniconda2/lib/python2.7/site-packages/conda/activate.py", line 701, in <genexpr>
    paths = (entry.path for entry in scandir(join(prefix, 'etc', 'conda', 'activate.d')))
  File "/home/dstest2/miniconda2/lib/python2.7/site-packages/scandir.py", line 564, in scandir_python
    raise posix_error(path)
OSError: [Errno 2] No such file or directory: u'/home/dstest2/miniconda2/envs/tf_new/etc/conda/activate.d'

$ /home/dstest2/miniconda2/bin/conda shell.posix activate tf_new

environment variables: CIO_TEST= CONDA_DEFAULT_ENV=tf_2.4 CONDA_EXE=/home/dstest2/miniconda2/bin/conda CONDA_MKL_INTERFACE_LAYER_BACKUP= CONDA_PREFIX=/home/dstest2/miniconda2/envs/tf_2.4 CONDA_PREFIX_1=/home/dstest2/miniconda2 CONDA_PROMPT_MODIFIER=(tf_2.4) CONDA_PYTHON_EXE=/home/dstest2/miniconda2/bin/python CONDA_ROOT=/home/dstest2/miniconda2 CONDA_SHLVL=2 CURL_CA_BUNDLE= LD_LIBRARY_PATH=/usr/local/cuda/lib64:/usr/local/cuda-9.0/lib64:/usr/local/cuda-11/lib 64:/usr/local/cuda-11.1/lib64:/usr/local/cuda-11.2/lib64::/usr/local/c uda-9.0/lib64/ PATH=/home/dstest2/miniconda2/bin:/home/dstest2/miniconda2/envs/tf_2.4/bin: /home/dstest2/miniconda2/bin:/home/dstest2/miniconda2/bin:/home/dstest 2/miniconda2/bin:/home/dstest2/.local/bin:/usr/local/cuda/bin:/home/ds test2/miniconda2/bin:/home/dstest2/miniconda2/bin:/home/dstest2/minico nda2/condabin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin: /bin:/usr/games:/usr/local/games:/snap/bin:/usr/local/cuda-9.0/bin REQUESTS_CA_BUNDLE= SSL_CERT_FILE=

 active environment : tf_2.4
active env location : /home/dstest2/miniconda2/envs/tf_2.4
        shell level : 2
   user config file : /home/dstest2/.condarc

populated config files : /home/dstest2/.condarc conda version : 4.8.4 conda-build version : not installed python version : 2.7.17.final.0 virtual packages : __glibc=2.27 __cuda=11.2 base environment : /home/dstest2/miniconda2 (writable) channel URLs : https://repo.anaconda.com/pkgs/main/linux-64 https://repo.anaconda.com/pkgs/main/noarch https://repo.anaconda.com/pkgs/r/linux-64 https://repo.anaconda.com/pkgs/r/noarch package cache : /home/dstest2/miniconda2/pkgs /home/dstest2/.conda/pkgs envs directories : /home/dstest2/miniconda2/envs /home/dstest2/.conda/envs platform : linux-64 user-agent : conda/4.8.4 requests/2.22.0 CPython/2.7.17 Linux/5.4.0-117-generic ubuntu/18.04.3 glibc/2.27 UID:GID : 1000:1000 netrc file : /home/dstest2/.netrc offline mode : False

An unexpected error has occurred. Conda has prepared the above report.

If submitted, this report will be used by core maintainers to improve future releases of conda.

Conda info

active environment : base
    active env location : /home/dstest2/miniconda2
            shell level : 1
       user config file : /home/dstest2/.condarc
 populated config files : /home/dstest2/.condarc
          conda version : 4.8.4
    conda-build version : not installed
         python version : 2.7.17.final.0
       virtual packages : __glibc=2.27
                          __cuda=11.2
       base environment : /home/dstest2/miniconda2  (writable)
           channel URLs : https://repo.anaconda.com/pkgs/main/linux-64
                          https://repo.anaconda.com/pkgs/main/noarch
                          https://repo.anaconda.com/pkgs/r/linux-64
                          https://repo.anaconda.com/pkgs/r/noarch
          package cache : /home/dstest2/miniconda2/pkgs
                          /home/dstest2/.conda/pkgs
       envs directories : /home/dstest2/miniconda2/envs
                          /home/dstest2/.conda/envs
               platform : linux-64
             user-agent : conda/4.8.4 requests/2.22.0 CPython/2.7.17 Linux/5.4.0-117-generic ubuntu/18.04.3 glibc/2.27
                UID:GID : 1000:1000
             netrc file : /home/dstest2/.netrc
           offline mode : False

Conda config

==> /home/dstest2/.condarc <==
auto_activate_base: True

Conda list

# packages in environment at /home/dstest2/miniconda2:
#
# Name                    Version                   Build  Channel
_libgcc_mutex             0.1                        main    defaults
_openmp_mutex             5.1                       1_gnu    defaults
asn1crypto                1.4.0                      py_0    defaults
attrs                     21.4.0             pyhd3eb1b0_0    defaults
backports                 1.1                pyhd3eb1b0_0    defaults
backports-functools-lru-cache 1.6.4                    pypi_0    pypi
backports.shutil_get_terminal_size 1.0.0              pyhd3eb1b0_3    defaults
backports_abc             0.5                        py_1    defaults
beautifulsoup4            4.9.3                    pypi_0    pypi
bleach                    3.1.0                    py27_0    defaults
bs4                       0.0.1                    pypi_0    pypi
ca-certificates           2022.4.26            h06a4308_0    defaults
certifi                   2020.6.20          pyhd3eb1b0_3    defaults
cffi                      1.13.0           py27h2e261b9_0    defaults
chardet                   3.0.4                 py27_1003    defaults
click                     7.0                      pypi_0    pypi
colorama                  0.4.4              pyhd3eb1b0_0    defaults
conda                     4.8.4                    py27_0    defaults
conda-package-handling    1.6.0            py27h7b6447c_0    defaults
configparser              4.0.2                    py27_0    defaults
cryptography              2.8              py27h1ba5d50_0    defaults
cycler                    0.10.0                   pypi_0    pypi
datetime                  4.3                      pypi_0    pypi
decorator                 4.4.0                    py27_1    defaults
defusedxml                0.7.1              pyhd3eb1b0_0    defaults
entrypoints               0.3                      py27_0    defaults
enum34                    1.1.6                    py27_1    defaults
flask                     1.1.1                    pypi_0    pypi
freetype                  2.11.0               h70c0345_0    defaults
functools32               3.2.3.2                  py27_1    defaults
futures                   3.3.0                    py27_0    defaults
idna                      2.8                      py27_0    defaults
ipaddress                 1.0.23                     py_0    defaults
ipykernel                 4.9.0                    py27_1    defaults
ipython                   5.8.0                    py27_1    conda-forge
ipython_genutils          0.2.0              pyhd3eb1b0_1    defaults
itsdangerous              1.1.0                    pypi_0    pypi
jinja2                    2.10.3                   pypi_0    pypi
jpeg                      9e                   h7f8727e_0    defaults
jsonschema                3.0.2                    py27_0    defaults
jupyter_client            5.3.4                    py27_0    defaults
jupyter_core              4.6.3            py27h8c360ce_1    conda-forge
kiwisolver                1.1.0                    pypi_0    pypi
libedit                   3.1.20210910         h7f8727e_0    defaults
libffi                    3.4.2                h295c915_2    defaults
libgcc-ng                 11.2.0               h1234567_1    defaults
libgomp                   11.2.0               h1234567_1    defaults
libpng                    1.6.37               hbc83047_0    defaults
libsodium                 1.0.17               h516909a_0    conda-forge
libstdcxx-ng              11.2.0               h1234567_1    defaults
libtiff                   4.2.0                h2818925_1    defaults
libwebp-base              1.2.2                h7f8727e_0    defaults
lz4-c                     1.9.3                h295c915_1    defaults
markupsafe                1.1.1            py27hdf8410d_1    conda-forge
matplotlib                2.2.5                    pypi_0    pypi
mistune                   0.8.4            py27h7b6447c_0    defaults
nbconvert                 5.5.0                      py_0    defaults
nbformat                  4.4.0                    py27_0    conda-forge
ncurses                   6.3                  h7f8727e_2    defaults
notebook                  5.7.8                    py27_1    conda-forge
numpy                     1.16.6                   pypi_0    pypi
olefile                   0.46                     py27_0    defaults
opencv-contrib-python     4.2.0.32                 pypi_0    pypi
openssl                   1.1.1o               h7f8727e_0    defaults
pandas                    0.24.2                   pypi_0    pypi
pandoc                    2.12                 h06a4308_0    defaults
pandocfilters             1.5.0              pyhd3eb1b0_0    defaults
pathlib2                  2.3.5            py27h8c360ce_1    conda-forge
pexpect                   4.8.0              pyhd3eb1b0_3    defaults
pickleshare               0.7.5                    py27_0    defaults
pillow                    6.2.1                    pypi_0    pypi
prometheus_client         0.6.0                    py27_0    defaults
prompt_toolkit            1.0.15                     py_1    conda-forge
ptyprocess                0.7.0              pyhd3eb1b0_2    defaults
pycosat                   0.6.3            py27h7b6447c_0    defaults
pycparser                 2.19                     py27_0    defaults
pygments                  2.3.1                    py27_0    defaults
pyopenssl                 19.1.0                   py27_0    defaults
pyparsing                 2.4.7                    pypi_0    pypi
pyrsistent                0.15.7           py27hdf8410d_1    conda-forge
pysocks                   1.7.1                    py27_0    defaults
python                    2.7.17               h9bab390_0    defaults
python-dateutil           2.8.2              pyhd3eb1b0_0    defaults
python_abi                2.7                    1_cp27mu    conda-forge
pytz                      2020.1                   pypi_0    pypi
pyyaml                    5.3.1                    pypi_0    pypi
pyzmq                     19.0.0           py27h76efe43_1    conda-forge
readline                  7.0                  h7b6447c_5    defaults
requests                  2.22.0                   py27_0    defaults
ruamel_yaml               0.15.46          py27h14c3975_0    defaults
scandir                   1.10.0             pyh5d7bf9c_3    defaults
scipy                     1.2.3                    pypi_0    pypi
seaborn                   0.9.1                    pypi_0    pypi
selenium                  3.141.0                  pypi_0    pypi
send2trash                1.8.0              pyhd3eb1b0_1    defaults
setuptools                41.4.0                   py27_0    defaults
simplegeneric             0.8.1                    py27_2    defaults
singledispatch            3.7.0           pyhd3eb1b0_1001    defaults
six                       1.16.0             pyhd3eb1b0_1    defaults
soupsieve                 1.9.6                    pypi_0    pypi
sqlite                    3.30.0               h7b6447c_0    defaults
subprocess32              3.5.4                    pypi_0    pypi
termcolor                 1.1.0                    pypi_0    pypi
terminado                 0.8.3            py27h8c360ce_1    conda-forge
testpath                  0.4.2                    py27_0    defaults
tk                        8.6.12               h1ccaba5_0    defaults
tornado                   5.1.1            py27h7b6447c_0    defaults
tqdm                      4.63.0             pyhd3eb1b0_0    defaults
traitlets                 4.3.3                    py27_0    defaults
urllib3                   1.24.2                   py27_0    defaults
wcwidth                   0.2.5              pyhd3eb1b0_0    defaults
webencodings              0.5.1                    py27_1    defaults
werkzeug                  0.16.0                   pypi_0    pypi
xz                        5.2.5                h7f8727e_1    defaults
yaml                      0.1.7                had09818_2    defaults
zeromq                    4.3.2                he1b5a44_2    conda-forge
zlib                      1.2.12               h7f8727e_2    defaults
zope-interface            5.1.0                    pypi_0    pypi
zstd                      1.5.2                ha4553b6_0    defaults

Additional Context

The ends were working fine this error occurred once I updated Conda.

type::bug

opened by dilpreet7365 0

strict channel_priority causes nonsense UnsatisfiableError

Checklist

[X] I added a descriptive title
[X] I searched for other issues and couldn't find a solution or duplication
[X] I already searched in Google and didn't find any good information or help
[X] I looked at the docs and didn't see anything to help

What happened?

With channel_priority: strict in my .condarc, I get

UnsatisfiableError: The following specifications were found to be incompatible with each other

when creating a new environment, but, looking at the conflicts, I see none. No such problem arises with an empty .condarc, and I experience no environment problems.

Conda info

active environment : base
    active env location : /home/mwilkins/miniconda
            shell level : 1
       user config file : /home/mwilkins/.condarc
 populated config files : 
          conda version : 4.13.0
    conda-build version : not installed
         python version : 3.10.5.final.0
       virtual packages : __linux=4.14.157=0
                          __glibc=2.17=0
                          __unix=0=0
                          __archspec=1=x86_64
       base environment : /home/mwilkins/miniconda  (writable)
      conda av data dir : /home/mwilkins/miniconda/etc/conda
  conda av metadata url : None
           channel URLs : https://repo.anaconda.com/pkgs/main/linux-64
                          https://repo.anaconda.com/pkgs/main/noarch
                          https://repo.anaconda.com/pkgs/r/linux-64
                          https://repo.anaconda.com/pkgs/r/noarch
          package cache : /home/mwilkins/miniconda/pkgs
                          /home/mwilkins/.conda/pkgs
       envs directories : /home/mwilkins/miniconda/envs
                          /home/mwilkins/.conda/envs
               platform : linux-64
             user-agent : conda/4.13.0 requests/2.28.0 CPython/3.10.5 Linux/4.14.157-17.cernvm.x86_64 scientific/4.5.1.0 glibc/2.17
                UID:GID : 540:551
             netrc file : None
           offline mode : False

Conda config

==> /home/mwilkins/.condarc <==
channel_priority: strict
channels:
  - conda-forge
  - bioconda
  - defaults

Conda list

NB: I run the command to create a new environment from the base environment.

# packages in environment at /home/mwilkins/miniconda:
#
# Name                    Version                   Build  Channel
_libgcc_mutex             0.1                 conda_forge    conda-forge
_openmp_mutex             4.5                       2_gnu    conda-forge
black                     22.3.0             pyhd8ed1ab_0    conda-forge
brotlipy                  0.7.0           py310h5764c6d_1004    conda-forge
bzip2                     1.0.8                h7f98852_4    conda-forge
c-ares                    1.18.1               h7f98852_0    conda-forge
ca-certificates           2022.5.18.1          ha878542_0    conda-forge
certifi                   2022.5.18.1     py310hff52083_0    conda-forge
cffi                      1.15.0          py310h0fdd8cc_0    conda-forge
charset-normalizer        2.0.12             pyhd8ed1ab_0    conda-forge
click                     8.1.3           py310hff52083_0    conda-forge
colorama                  0.4.4              pyh9f0ad1d_0    conda-forge
conda                     4.13.0          py310hff52083_1    conda-forge
conda-package-handling    1.8.1           py310h5764c6d_1    conda-forge
cryptography              37.0.2          py310h597c629_0    conda-forge
curl                      7.83.1               h7bff187_0    conda-forge
dataclasses               0.8                pyhc8e2a94_3    conda-forge
expat                     2.4.8                h27087fc_0    conda-forge
flake8                    4.0.1              pyhd8ed1ab_2    conda-forge
gettext                   0.19.8.1          h73d1719_1008    conda-forge
git                       2.35.3          pl5321h36853c3_0    conda-forge
idna                      3.3                pyhd8ed1ab_0    conda-forge
importlib-metadata        1.7.0              pyhd8ed1ab_1    conda-forge
importlib_metadata        1.7.0                hd8ed1ab_1    conda-forge
keyutils                  1.6.1                h166bdaf_0    conda-forge
krb5                      1.19.3               h3790be6_0    conda-forge
ld_impl_linux-64          2.36.1               hea4e1c9_2    conda-forge
libcurl                   7.83.1               h7bff187_0    conda-forge
libedit                   3.1.20191231         he28a2e2_2    conda-forge
libev                     4.33                 h516909a_1    conda-forge
libffi                    3.4.2                h7f98852_5    conda-forge
libgcc-ng                 12.1.0              h8d9b700_16    conda-forge
libgomp                   12.1.0              h8d9b700_16    conda-forge
libiconv                  1.16                 h516909a_0    conda-forge
libnghttp2                1.47.0               h727a467_0    conda-forge
libnsl                    2.0.0                h7f98852_0    conda-forge
libssh2                   1.10.0               ha56f1ee_2    conda-forge
libstdcxx-ng              12.1.0              ha89aaad_16    conda-forge
libuuid                   2.32.1            h7f98852_1000    conda-forge
libzlib                   1.2.12               h166bdaf_0    conda-forge
mccabe                    0.6.1                      py_1    conda-forge
mypy_extensions           0.4.3           py310hff52083_5    conda-forge
ncurses                   6.3                  h27087fc_1    conda-forge
openssl                   1.1.1o               h166bdaf_0    conda-forge
pathspec                  0.9.0              pyhd8ed1ab_0    conda-forge
pcre2                     10.37                h032f7d1_0    conda-forge
perl                      5.32.1          2_h7f98852_perl5    conda-forge
pip                       22.1.2             pyhd8ed1ab_0    conda-forge
platformdirs              2.5.1              pyhd8ed1ab_0    conda-forge
pycodestyle               2.8.0              pyhd8ed1ab_0    conda-forge
pycosat                   0.6.3           py310h5764c6d_1010    conda-forge
pycparser                 2.21               pyhd8ed1ab_0    conda-forge
pydocstyle                6.1.1              pyhd8ed1ab_0    conda-forge
pyflakes                  2.4.0              pyhd8ed1ab_0    conda-forge
pyopenssl                 22.0.0             pyhd8ed1ab_0    conda-forge
pysocks                   1.7.1           py310hff52083_5    conda-forge
python                    3.10.5          h582c2e5_0_cpython    conda-forge
python_abi                3.10                    2_cp310    conda-forge
readline                  8.1.2                h0f457ee_0    conda-forge
requests                  2.28.0             pyhd8ed1ab_0    conda-forge
ruamel_yaml               0.15.80         py310h5764c6d_1007    conda-forge
setuptools                62.3.4          py310hff52083_0    conda-forge
six                       1.16.0             pyh6c4a22f_0    conda-forge
snakefmt                  0.6.1              pyhdfd78af_0    bioconda
snowballstemmer           2.2.0              pyhd8ed1ab_0    conda-forge
sqlite                    3.38.5               h4ff8645_0    conda-forge
tk                        8.6.12               h27826a3_0    conda-forge
toml                      0.10.2             pyhd8ed1ab_0    conda-forge
tomli                     2.0.1              pyhd8ed1ab_0    conda-forge
tqdm                      4.64.0             pyhd8ed1ab_0    conda-forge
typed-ast                 1.5.4           py310h5764c6d_0    conda-forge
typing_extensions         4.2.0              pyha770c72_1    conda-forge
tzdata                    2022a                h191b570_0    conda-forge
urllib3                   1.26.9             pyhd8ed1ab_0    conda-forge
wheel                     0.37.1             pyhd8ed1ab_0    conda-forge
xz                        5.2.5                h516909a_1    conda-forge
yaml                      0.2.5                h7f98852_2    conda-forge
zipp                      3.8.0              pyhd8ed1ab_0    conda-forge
zlib                      1.2.12               h166bdaf_0    conda-forge

Additional Context

Command:

conda env create

environment.yml:

name: test
channels:
  - bioconda
  - conda-forge
dependencies:
  - numpy=1.22.3
  - snakemake=7.8.2
  - xrootd=5.4.3

Output:

Collecting package metadata (repodata.json): done
Solving environment: \ 
Found conflicts! Looking for incompatible packages.
This can take several minutes.  Press CTRL-C to abort.
failed                                                                                                                                                                          \ 
Solving environment: \ 
Found conflicts! Looking for incompatible packages.
This can take several minutes.  Press CTRL-C to abort.
failed                                                                                                                                                                            

UnsatisfiableError: The following specifications were found to be incompatible with each other:

Output in format: Requested package -> Available versions

Package python conflicts for:
xrootd=5.4.3 -> python_abi=3.8[build=*_cp38] -> python[version='3.10.*|3.8.*|3.7.*|3.9.*']
snakemake=7.8.2 -> aioeasywebdav -> python[version='2.7.*|3.5.*|3.6.*|>=3.6|>=3.6,<3.7.0a0|>=3.7,<3.8.0a0|>=3.8,<3.9.0a0|>=3.9,<3.10.0a0|>=3.7|>=2.7|3.4.*|>=3.10,<3.11.0a0|>=2.7,
<2.8.0a0|>=3.5,<3.6.0a0|2.7.*|>=3.4|>=3.7.1,<3.8.0a0|>=3.5|2.7.*|>=3.6']
xrootd=5.4.3 -> python[version='>=3.10,<3.11.0a0|>=3.8,<3.9.0a0|>=3.7,<3.8.0a0|>=3.9,<3.10.0a0']
numpy=1.22.3 -> python[version='>=3.10,<3.11.0a0|>=3.8,<3.9.0a0|>=3.9,<3.10.0a0']
numpy=1.22.3 -> python_abi=3.8[build=*_cp38] -> python[version='2.7.*|3.10.*|3.8.*|3.9.*|>=3.7,<3.8.0a0|>=3.6,<3.7.0a0|>=2.7,<2.8.0a0|3.6.*|3.5.*|>=3.5,<3.6.0a0']

Package openssl conflicts for:
numpy=1.22.3 -> pypy3.9[version='>=7.3.9'] -> openssl[version='>=1.1.1a,<1.1.2a|>=1.1.1d,<1.1.2a|>=1.1.1e,<1.1.2a|>=1.1.1f,<1.1.2a|>=1.1.1g,<1.1.2a|>=1.1.1h,<1.1.2a|>=1.1.1i,<1.1
.2a|>=1.1.1j,<1.1.2a|>=1.1.1k,<1.1.2a|>=1.1.1l,<1.1.2a|>=1.1.1n,<1.1.2a|>=3.0.2,<4.0a0|>=3.0.3,<4.0a0|>=1.1.1o,<1.1.2a|>=3.0.0,<4.0a0|>=1.1.1m,<1.1.2a']
xrootd=5.4.3 -> openssl[version='>=1.1.1o,<1.1.2a|>=3.0.3,<4.0a0']
xrootd=5.4.3 -> krb5[version='>=1.19.3,<1.20.0a0'] -> openssl[version='>=1.0.2o,<1.0.3a|>=1.0.2p,<1.0.3a|>=1.1.1a,<1.1.2a|>=1.1.1d,<1.1.2a|>=1.1.1e,<1.1.2a|>=1.1.1f,<1.1.2a|>=1.1
.1g,<1.1.2a|>=1.1.1h,<1.1.2a|>=1.1.1i,<1.1.2a|>=1.1.1j,<1.1.2a|>=1.1.1k,<1.1.2a|>=1.1.1l,<1.1.2a|>=3.0.0,<4.0a0|>=3.0.2,<4.0a0|>=1.1.1n,<1.1.2a|>=1.1.1m,<1.1.2a|>=1.1.1c,<1.1.2a|
>=1.1.1b,<1.1.2a']The following specifications were found to be incompatible with your system:

  - feature:/linux-64::__glibc==2.17=0
  - feature:|@/linux-64::__glibc==2.17=0
  - numpy=1.22.3 -> libgcc-ng[version='>=7.5.0'] -> __glibc[version='>=2.17']
  - xrootd=5.4.3 -> __glibc[version='>=2.17,<3.0.a0']

Your installed version is: 2.17

Note that strict channel priority may have removed packages required for satisfiability.

You can see that python=3.9 and openssl=3.0.3 would satisfy the package requirements and that glibc 2.17, installed on my system, does in fact satisfy the requirements.

There is already a note about strict channel priority, but ultimately, this output is unhelpful for debugging.

I get conda by running miniconda.sh from

wget -nv http://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh -O miniconda.sh

type::bug

opened by goi42 0

Move all `conda-content-trust` logic into `conda-content-trust`
Description

In an effort to speed up package signature verification we move the verification process to occur after solving. This way only the packages included in the transaction are validated (tens of packages, not thousands).

A secondary goal was to move even more of the signature verification logic into conda-content-trust itself. This is in preparation for making this a conda plugin once the framework is available (#11435). With this change, conda knows/cares even less about what and how signature verification happens.

Resolves #11154 See conda/conda-content-trust#29

Checklist - did you ...

[ ] Add a file to the news directory (using the template) for the next release's release notes?

[ ] Add / update necessary tests?

[ ] Add / update outdated documentation?

cla-signed
opened by kenodegard 0
Convert `README.rst` to `README.md`
Description

Our README no longer serves the dual purpose of being a landing page for our docs as well as here on GitHub so using RST is overkill.

Also updates links.

Resolves #10181

Checklist - did you ...

[x] Add a file to the news directory (using the template) for the next release's release notes?

[X] ~Add / update necessary tests?~

[X] Add / update outdated documentation?

cla-signed
opened by kenodegard 0
Minor documentation update - `pip` dependency
Description

Documentation update. Includes an explicit declaration of pip as a dependency when installing a pip-installed dependency.

Resolves warning:

Warning: you have pip-installed dependencies in your environment file, but you do not list pip itself as one of your conda dependencies. Conda may not use the correct pip to install your packages, and they may end up in the wrong place. Please add an explicit pip dependency. I'm adding one for you, but still nagging you.

Checklist - did you ...

[x] Add a file to the news directory (using the template) for the next release's release notes?

[x] Add / update necessary tests?

[x] Add / update outdated documentation?
opened by SamuelWN 1

Releases(4.13.0)

4.13.0(May 19, 2022)
Enhancements

Introducing conda clean --logfiles to remove logfiles generated by conda-libmamba-solver. (#11387)

Add the solver name and version to the user-agent. (#11415, #11455)

Attempt parsing HTTP errors as a JSON and extract error details. If present, prefer these details instead of those hard-coded. (#11440)

Bug fixes

Fix inconsistencies with conda clean --dryrun (#11385)

Standardize tarball & package finding in conda clean (#11386, #11391)

Fix escape_channel_url logic on Windows (#11416)

Use 'Accept' header, not 'Content-Type' in GET header (#11446)

Allow extended user-agent collection to fail but log the exception (#11455)

Deprecations

Removing deprecated conda.cli.activate. Originally deprecated in conda 4.6.0 in May 2018. (#11309)

Removing deprecated conda.compat. Originally deprecated in conda 4.6.0 in May 2018. (#11322)

Removing deprecated conda.install. Originally deprecated in conda 4.6.0 in May 2018. (#11323)

Removing deprecated conda.cli.main_help. Originally deprecated in conda 4.6.0 in May 2018. (#11325)

Removed unused conda.auxlib.configuration. (#11349)

Removed unused conda.auxlib.crypt. (#11349)

Removed unused conda.auxlib.deprecation. (#11349)

Removed unused conda.auxlib.factory. (#11349)

Removed minimally used conda.auxlib.path. (#11349)

Removed conda.exports.CrossPlatformStLink, a Windows Python <3.2 fix for os.lstat.st_nlink. (#11351)

Remove Python 2.7 and other legacy code (#11364)

conda run --live-stream aliases conda run --no-capture-output. (#11422)

Removes unused exceptions. (#11424)

Combines conda_env.exceptions with conda.exceptions. (#11425)

Drop Python 3.6 support. (#11453)

Remove outdated test test_init_dev_and_NoBaseEnvironmentError (#11469)

Docs

Initial implementation of deep dive docs (#11059)

Correction of RegisterPython description in Windows Installer arguments. (#11312)

Added autodoc documentation for conda compare. (#11336)

Remove duplicated instruction in manage-python.rst (#11381)

Updated conda cheatsheet. (#11443)

Fix typos throughout the codebase (#11448)

Fix conda activate example (#11471)

Updated conda 4.12 cheatsheet with new anaconda distribution version (#11479)

Other

Add Python 3.10 as a test target. (#10992)

Replace custom conda._vendor with vendoring (#11290)

Replace conda.auxlib.collection.frozendict with vendored frozendict (#11398)

Reorganize and new tests for conda.cli.main_clean (#11360)

Removing vendored usage of urllib3 and instead implementing our own wrapper around std. lib urllib (#11373)

Bump vendored py-cpuinfo version 4.0.0 → 8.0.0. (#11393)

Add informational Codecov status checks (#11400)

Contributors

@beeankha made their first contribution in #11469

@ChrisPanopoulos made their first contribution in #11312

@conda-bot

@dholth

@jaimergp

@jezdez

@kathatherine made their first contribution in #11443

@kenodegard

@kianmeng made their first contribution in #11448

@simon9500 made their first contribution in #11381

@thomasrockhu-codecov made their first contribution in #11400

@travishathaway made their first contribution in #11373

@pre-commit-ci[bot]

Full Changelog: https://github.com/conda/conda/compare/4.12.0...4.13.0
Source code(tar.gz)
Source code(zip)
4.12.0(Mar 8, 2022)
Enhancements

Add support for libmamba integrations. (#11193)

This is a new experimental and opt-in feature that allows use of the new conda-libmamba-solver for an improved user experience, based on the libmamba community project – the library version of the mamba package manager.

After updating your conda version to 4.12.0, please follow these steps to try out the new libmamba solver integration:

Install the separate conda-libmamba-solver package in your conda base environment:

conda install -n base conda-libmamba-solver

Try out the solver using the --experimental-solver=libmamba command line option.

E.g. with a dry-run to install the scipy pacakge:

conda create -n demo scipy --dry-run --experimental-solver=libmamba

Or install in an activated conda environment:

conda activate my-environment conda install scipy --experimental-solver=libmamba

Make sure that conda env update -f sets env vars from the referenced yaml file. (#10652)

Improve command line argument quoting, especially for conda run. (#11189)

Allow conda run to work in read-only environments. (#11215)

Add support for prelink_message. (#11123)

Added conda.CONDA_SOURCE_ROOT. (#11182)

Bug fixes

Refactored conda.utils.ensure_comspec_set into conda.utils.get_comspec. (#11168)

Refactored conda.cli.common.is_valid_prefix into conda.cli.common.validate_prefix. (#11172)

Instantiate separate S3 session for thread-safety. (#11038)

Change overly verbose info log to debug. (#11260)

Remove five.py and update metaclass definitions. (#11267)

Remove unnecessary conditional in setup.py (#11013)

Docs

Clarify on AIE messaging in download.rst. (#11221)

Fix conda environment variable echo, update example versions. (#11237)

Fixed link in docs. (#11268)

Update profile examples. (#11278)

Fix typos. (#11070)

Document conda run command. (#11299)

Other

Added macOS to continuous integration. (#10875)

Added ability to build per-pullrequest review builds. (#11135)

Improved subprocess handling on Windows. (#11179)

Add CONDA_SOURCE_ROOT env var. (#11182)

Automatically check copyright/license disclaimer & encoding pragma. (#11183)

Development environment per Python version. (#11233)

Add concurrency group to cancel GHA runs on repeated pushes to branch/PR. (#11258)

Only run GHAs on non-forks. (#11265)

Contributors

@opoplawski

@FaustinCarter made their first contribution in https://github.com/conda/conda/pull/10652

@jaimergp

@rhoule-anaconda

@jezdez

@hajapy

@erykoff

@uwuvalon made their first contribution in https://github.com/conda/conda/pull/11221

@kenodegard

@manics made their first contribution in https://github.com/conda/conda/pull/11237

@NaincyKumariKnoldus made their first contribution in https://github.com/conda/conda/pull/11268

@autotmp made their first contribution in https://github.com/conda/conda/pull/11278

@yuvipanda made their first contribution in https://github.com/conda/conda/pull/11013

@astrojuanlu

@marcelotrevisani

Full Changelog: https://github.com/conda/conda/compare/4.11.0...4.12.0
Source code(tar.gz)
Source code(zip)
4.11.0(Nov 22, 2021)
Enhancements

Allow channel_alias to interpolate environment variables.

Support running conda with PyPy on Windows.

Add ability to add, append and prepend to sequence values when using the conda config subcommand.

Support Python 3.10 in version parser.

Add XDG_CONFIG_HOME to the conda search path following the XDG Base Directory Specification (XDGBDS).

Bug fixes

Fix the PowerShell activator to not show an error when unsetting environment variables.

Remove superfluous eval statements in fish shell integration.

Indent the conda fish integration file using fish_indent.

Fix handling of environment variables containing equal signs (=).

Handle permission errors when listing all known prefixes.

Catch Unicode decoding errors when parsing conda-meta files.

Fix handling write errors when trying to create package cache or env directories.

Docs

Update path of conda repo in RHEL based systems to /etc/yum.repos.d/conda.repo.

Fix the advanced pip example to stop using the now invalid file: prefix.

Minor docs cleanup and adding Code of Conduct.

Add auto-built architecture documentation for conda based on the C4 Model. See the conda documentation for more information.

Expand the contributing documentation with a section about static code analysis and code linting.

Add developer guide section to the documentation, including a conda architecture overview.

Stop referring to updating anaconda when conda update fails with an error.

Other

Build Docker images periodically on GitHub Actions for the continuous integration testing on Linux, storing them on GitHub Packages's registry for reduced latency and cost when using Docker Hub.

Simplify the Linux GitHub actions workflows by combining used shell scripts.

Add periodic GitHub Actions workflow to review old issues in the conda issue tracker and mark them as stale if no feedback is provided in a sensible amount of time, eventually closing them.

Add periodic GitHub Actions workflow to lock the comment threads of old issues and pull requests in the conda GitHub repository to surface regressions with new issues instead.

Refactor test suite to use more GitHub Actions runners in parallel, reducing total run time by 50%.

Switched the issue tracker to use forms with additional questions for bug reporters to help in ticket triage.

Add and automatically run pre-commit as part of the CI system to improve the code quality continuously and raise issues in contributed patches early on.

The used code linters are: flake8, pylint and bandit.

The Python code formatter black is used as well but is only enforced on changed code in a commit and not to the whole code base at once.

Automatically build the conda package upon the successful merge into the master branch and upload it to the conda-canary channel on anaconda.org.

To try conda out simply run:

conda install -c conda-canary/label/dev conda

Automate adding new issues to public GitHub project board to facilitate issue triage.

Update GitHub issue and pull request labels to be more consistent.

Start using rever for release management.

(preview) Enable one-click gitpod and GitHub Codespaces setup for Linux development.

Contributors

Benjamin Bertrand

Chawye Hsu

Cheng H. Lee

Dan Meador

Daniel Bast

Daniel Holth

Gregor Kržmanc

Hsin-Hsiang Peng

Ilan Cosman

Isuru Fernando

Jaime Rodríguez-Guerra

Jan-Benedikt Jagusch

Jannis Leidel

John Flavin

Jonas Haag

Ken Odegard

Kfir Zvi

Mervin Fansler

bfis

mkincaid

pre-commit CI

Source code(tar.gz)
Source code(zip)
4.10.3(Jun 30, 2021)
Bug fixes

Revert "Don't create an unused S3 client at import time (#10516)" in 4.10.2 that introduced a regression for users of S3-based channels. (#10756)

Source code(tar.gz)
Source code(zip)
4.10.2(Jun 28, 2021)
Enhancements

Add --dry-run option to conda env create (#10635)

Print warning about pip-installed dependencies only once (#10638)

Explicit install now respects --download-only flag (#10688)

Bump vendored tqdm version (#10721)

Bug fixes

Fix changeps1 handling for PowerShell (#10624)

Handle unbound $PS1 so sh activation does not fail with set -u (#10701)

Fix sh activation so $PATH is properly restored on errors (#10631)

Fix -c option handling so defaults channel is not always re-added (#10735)

Fix artifact verification-related warnings and errors (#10627, #10677)

Fix log level used in conda/core/prefix_data.py (#9998)

Fix log level used when fetching artifact verification metadata (#10621)

Don't create an unused S3 client at import time (#10516)

Don't load binstar_client until needed (#10692)

Reflect dropping of older Python versions in setup.py (#10642)

Docs

Merge release notes and changelog to reduce maintenance burden (#10745)

Add mentions to PyPy, Anaconda terms of service (#10329, #10712)

Update Python versions in examples (#10329, #10744)

Update install macOS instructions (#10728)

Contributors

@AlbertDeFusco

@awwad

@casperdcl

@cgranade

@chenghlee

@ColemanTom

@dan-hook

@dbast

@ericpre

@HedgehogCode

@jamesp

@jezdez

@johnhany97

@lightmare

@mattip

@maxerbubba

@mrakitin

@stinos

@thermokarst

Source code(tar.gz)
Source code(zip)
4.10.1(Apr 15, 2021)
4.10.1 (2021-04-12)

Bug fixes

Fix version detection for __linux virtual package (#10599)

Fix import from conda_content_trust (#10589)

Fix how URL for verification metadata files are constructed (#10617)

Partially fix profile $PATH setup on MSYS2 (#10459)

Remove .empty directory even when rsync is not installed (#10331)

Contributors

@awwad

@chenghlee

@codepage949

@niklasholm

Source code(tar.gz)
Source code(zip)
4.10.0(Apr 9, 2021)
4.10.0 (2021-03-30)

NOTE: This release formally drops support for Python 2.7 and Python < 3.6.

Enhancements

Add pilot support for metadata signatures and verification (#10578)

Add __linux virtual package (#10552, #10561)

Support nested keys when using conda config --get (#10447, #10572)

Support installing default packages when using conda env create (#10530)

Support HTTP sources for conda env update -f (#10536)

Make macOS code signing operations less verbose (#10372)

Bug fixes

Fix conda search crashing on Python 3.9 (#10542)

Allow {channel}::pip to satisfy pip requirements (#10550)

Support {host}:{port} specifications in environment YAML files (#10417)

Fall back to system .condarc if user .condarc is absent (#10479)

Try UTF-16 if UTF-8 fails when reading environment YAML files (#10356)

Properly parse Python version >= 3.10 (#10478)

Fix zsh initialization when $ZDOTDIR is defined (#10413)

Fix path handling for csh (#10410)

Fix setup.py requirement for vendored ruamel_yaml_conda (#10441)

Fix errors when pickling vendored auxlib objects (#10386)

Docs

Document the __unix and __windows virtual packages (#10511)

Update list of supported and default versions of Python (#10531)

Favor using pip instead of setup.py when setting up CI (#10308)

Miscellaneous

CI: drop Python 2.7 and add Python 3.9 (#10548)

Contributors

@awwad

@BastianZim

@beenje

@bgobbi

@blubs

@chenghlee

@cjmartian

@ericpre

@erykoff

@felker

@giladmaya

@jamesmyatt

@mingwandroid

@opoplawski

@saadparwaiz1

@saucoide

Source code(tar.gz)
Source code(zip)
4.9.2(Nov 12, 2020)
4.9.2 (2020-11-10)

Enhancements

Use vendored tqdm in conda.resolve for better consistency (#10337)

Bug fixes

Revert to previous naming scheme for repodata cache files when use_only_tar_bz2 config option is false (#10350)

Docs

Fix missing release notes (#10342)

Fix permission errors when configuring deb repositories (#10347)

Contributors

@chenghlee

@csoja

@dylanmorroll

@sscherfke

Source code(tar.gz)
Source code(zip)
4.9.1(Oct 27, 2020)
4.9.1 (2020-10-26)

Enhancements

Respect PEP 440 ~= "compatible release" clause (#10313)

Bug fixes

Remove preload_openssl for Win32 (#10298)

Add if exist to Windows registry hook (#10305)

Contributors

@mingwandroid

Source code(tar.gz)
Source code(zip)
4.9.0(Oct 19, 2020)
4.9.0 (2020-10-19)

Enhancements:

Add osx-arm64 as a recognized platform (#10128, #10134, #10137)

Resign files modified during installation on ARM64 macOS (#10260)

Add __archspec virtual package to identify CPU microarchitecture (#9930)

Add __unix and __win virtual packages (#10214)

Add --no-capture--output option to conda run (#9646)

Add --live-stream option to conda run (#10270)

Export and import environment variables set using conda env config (#10169)

Cache repodata from file:// channels (#9730)

Do not relink already-installed packages (#10208)

Speed up JSON formatting in logz module (#10189)

Bug fixes:

Stop env remove --dry-run from actually removing environments (#10261)

Virtual package requirements are now considered by the solver (#10057)

Fix cached filename processing when using only tar.bz2 (#10193)

Stop showing solver hints about CUDA when it is not a dependency (#10275)

Ignore virtual packages when checking environment consistency (#10196)

Fix config --json output errors in certain circumstances (#10194)

More consistent error handling by conda shell (#10238)

Bump vendored version of tqdm to fix various threading and I/O bugs (#10266)

Docs:

Correctly state default /AddToPath option in Windows installer (#10179)

Fix typos in --repodata-fn help text (#10279)

Miscellaneous:

Update CI infrastructure to use GitHub Actions (#10176, #10186, #10234)

Update README badge to show GitHub Actions status (#10254)

Contributors

@AlbertDeFusco

@angloyna

@bbodenmiller

@casperdcl

@chenghlee

@chrisburr

@cjmartian

@dhirschfeld

@ericpre

@gabrielcnr

@InfiniteChai

@isuruf

@jjhelmus

@LorcanHamill

@maresb

@mingwandroid

@mlline00

@xhochy

@ydmytryk

Source code(tar.gz)
Source code(zip)
4.8.5(Oct 5, 2020)
4.8.5 (2020-09-14)

Enhancements

Add osx-arm64 as a recognized platform (#10128, #10134)

Contributors

@isuruf

@jjhelmus

Source code(tar.gz)
Source code(zip)
4.8.4(Aug 12, 2020)
4.8.4 (2020-08-06)

Enhancements:

Add linux-ppc64 as a recognized platform (#9797, #9877)

Add linux-s390x as a recognized platform (#9933, #10051)

Add spinner to pip installer (#10032)

Add support for running conda in PyPy (#9764)

Support creating conda environments using remote specification files (#9835)

Allow request retries on various HTTP errors (#9919)

Add compare command for environments against a specification file (#10022)

Add (preliminary) support for JSON-format activation (#8727)

Properly handle the CURL_CA_BUNDLE environment variable (#10078)

More uniformly handle $CONDA_PREFIX when exporting environments (#10092)

Enable trailing _ to anchor OpenSSL-like versions (#9859)

Replace listdir and glob with scandir (#9889)

Ignore virtual packages when searching for constrained packages (#10117)

Add virtual packages to be considered in the solver (#10057)

Bug fixes:

Prevent remove --all from deleting non-environment directories (#10086)

Prevent create --dry-run --yes from deleting existing environments (#10090)

Remove extra newline from environment export file (#9649)

Print help on incomplete conda env config command rather than crashing (#9660)

Correctly set exit code/errorlevel when conda run exits (#9665)

Send "inconsistent environment" warnings to stderr to avoid breaking JSON output (#9738)

Fix output formatting from post-link scripts (#9841)

Fix URL parsing for channel subdirs (#9844)

Fix conda env export -f sometimes producing empty output files (#9909)

Fix handling of Python releases with two-digit minor versions (#9999)

Do not use gid to determine if user is an admin on *nix platforms (#10002)

Suppress spurious xonsh activation warnings (#10005)

Fix crash when running conda update --all on a nonexistent environment (#10028)

Fix collections import for Python 3.8 (#10093)

Fix regex-related deprecation warnings (#10093, #10096)

Fix logic error when running under Python 2.7 on 64-bit platforms (#10108)

Fix Python 3.8 leaked semaphore issue (#10115)

Docs:

Fix formatting and typos (#9623, #9689, #9898, #10042)

Correct location for yum repository configuration files (#9988)

Clarify usage for the --channel option (#10054)

Clarify Python is not installed by default into new environments (#10089)

Miscellaneous:

Fixes to tests and CI pipelines (#9842, #9863, #9938, #9960, #10010)

Remove conda-forge dependencies for developing conda (#9857, #9871)

Audit YAML usage for safe_load vs round_trip_load (#9902)

Contributors:

@alanhdu

@angloyna

@Anthchirp

@Arrowbox

@bbodenmiller

@beenje

@bernardoduarte

@birdsarah

@bnemanich

@chenghlee

@ChihweiLHBird

@cjmartian

@ericpre

@error404-beep

@esc

@hartb

@hugobuddel

@isuruf

@jjhelmus

@kalefranz

@mingwandroid

@mlline00

@mparry

@mrocklin

@necaris

@pdnm

@pradghos

@ravigumm

@Reissner

@scopatz

@sidhant007

@songmeixu

@speleo3

@tomsaleeba

@WinstonPais

Source code(tar.gz)
Source code(zip)
4.8.3(Mar 13, 2020)
4.8.3 (2020-03-13)

Docs:

Add release notes for 4.8.2 to docs (#9632)

Fix typos in docs (#9637, #9643)

Grammatical and formatting changes (#9647)

Bug fixes:

Account for channel is specs (#9748)

Contributors:

@bernardoduarte

@forrestwaters

@jjhelmus

@msarahan

@rrigdon

@timgates42

Source code(tar.gz)
Source code(zip)
4.8.2(Jan 24, 2020)
4.8.2 (2020-01-24)

Enhancements:

Solver messaging improvements (#9560)

Docs:

Added precedence and conflict info (#9565)

Added how to set env variables with config API (#9536)

Updated user guide, deleted Overview, minor clean up (#9581)

Add code of conduct (#9601, #9602, #9603, #9603, #9604 #9605)

Bug fixes:

change fish prompt only if changeps1 is true (#7000)

make frozendict JSON serializable (#9539)

Conda env create empyt dir (#9543)

Contributors:

@msarahan

@jjhelmus

@rrigdon

@soapy1

@teake

@csoja

@kfranz

Source code(tar.gz)
Source code(zip)
4.8.1(Dec 19, 2019)
4.8.1 (2019-12-19)

Enhancements:

improve performance for conda run by avoiding Popen.communicate (#9381)

Put conda keyring in /usr/share/keyrings on Debian (#9424)

refactor common.logic to fix some bugs and prepare for better modularity (#9427)

Support nested configuration (#9449)

Support Object configuration parameters (#9465)

Use freeze_installed to speed up conda env update (#9511)

add networking args to conda env create (#9525)

Docs:

fix string concatenation running words together regarding CONDA_EXE (#9411)

Fix typo ("list" -> "info") (#9433)

improve description of DLL loading verification and activating environments (#9453)

Installing with specific build number (#9534)

typo in condarc key envs_dirs (#9478)

Clarify channel priority and package sorting (#9492)

Bug fixes:

Fix calling python api run_command with list and string arguments (#9331)

set tmp to shortened path that excludes spaces (#9409)

Add subdir to PackageRecord dist_str (#9418)

revert init bash completion (#9421)

avoid function redefinition upon resourcing conda.fish (#9444)

propagate pip error level when creating envs with conda env (#9460)

fix incorrect chown call (#9464)

Don't check in pkgs for trash (#9472)

Fix running conda activate in multiple processes on windows (#9477)

remove setuptools from run_constrained in recipe (#9485)

Fix __conda_activate function to correctly return exit code (#9532)

fix overly greedy capture done by subprocess for conda run (#9537)

Contributors:

@AntoinePrv

@brettcannon

@bwildenhain

@cjmartian

@felker

@forrestwaters

@gilescope

@isuruf

@jeremyjliu

@jjhelmus

@jhultman

@marcuscaisey

@mbargull

@mingwandroid

@msarahan

@okhoma

@osamoylenko

@rrigdon

@rulerofthehuns

@soapy1

@tartansandal

Source code(tar.gz)
Source code(zip)
4.8.0(Dec 10, 2019)

This is a re-release of 4.8.0rc0 and has no further changes.
Source code(tar.gz)
Source code(zip)
4.8.0rc0(Nov 4, 2019)
4.8.0rc0 (2019-11-04)

Enhancements:

retry downloads if they fail, controlled by remote_max_retries and remote_backoff_factor configuration values (#9318)

redact authentication information in some URLs (#9341)

add osx version virtual package , __osx (#9349)

add glibc virtual package, __glibc (#9358)

Docs

removeed references to MD5s from docs (#9247)

Add docs on CONDA_DLL_SEARCH_MODIFICATION_ENABLED (#9286)

document threads, spec history and configuration (#9327)

more documentation on channels (#9335)

document the .condarc search order (#9369)

various minor documentation fixes (#9238, #9248, #9267, #9334, #9351, #9372, #9378, #9388, #9391, #9393)

Bug fixes

fix issues with xonsh activation on Windows (#8246)

remove unsupported --lock argument from conda clean (#8310)

do not add sys_prefix_path to failed activation or deactivation (#9282)

fix csh setenv command (#9284)

do not memorize PackageRecord.combined_depends (#9289)

use CONDA_INTERNAL_OLDPATH rather than OLDPATH in activation script (#9303)

fixes xonsh activation and tab completion (#9305)

fix what channels are queried when context.offline is True (#9385)

Contributors

@analog-cbarber

@andreasg123

@beckermr

@bryant1410

@colinbrislawn

@felker

@forrestwaters

@gabrielcnr

@isuruf

@jakirkham

@jeremyjliu

@jjhelmus

@jooh

@jpigla

@marcelotrevisani

@melund

@mfansler

@mingwandroid

@msarahan

@rrigdon

@scopatz

@soapy1

@WillyChen123

@xhochy

Source code(tar.gz)
Source code(zip)
4.7.12(Sep 12, 2019)
4.7.12 (2019-09-12)

Enhancements:

add support for env file creation based on explicit specs in history (#9093)

detect prefix paths when -p nor -n not given (#9135)

Add config parameter to disable conflict finding (for faster time to errors) (#9190)

Bug fixes

fix race condition with creation of repodata cache dir (#9073)

fix ProxyError expected arguments (#9123)

makedirs to initialize .conda folder when registering env - fixes permission errors with .conda folders not existing when package cache gets created (#9215)

fix list duplicates errors in reading repodata/prefix data (#9132)

fix neutered specs not being recorded in history, leading to unsatisfiable environments later (#9147)

Standardize "conda env list" behavior between platforms (#9166)

add JSON output to conda env create/update (#9204)

speed up finding conflicting specs (speed regression in 4.7.11) (#9218)

Contributors

@beenje

@Bezier89

@cjmartian

@forrestwaters

@jjhelmus

@martin-raden

@msarahan

@nganani

@rrigdon

@soapy1

@WesRoach

@zheaton

Source code(tar.gz)
Source code(zip)
4.7.11(Aug 6, 2019)
4.7.11 (2019-08-06)

Enhancements

add config for control of number of threads. These can be set in condarc or using environment variables. Names/default values are: default_threads/None, repodata_threads/None, verify_threads/1, execute_threads/1 (#9044)

Bug fixes

fix repodata_fns from condarc not being respected (#8998)

Fix handling of UpdateModifiers other than FREEZE_INSTALLED (#8999)

Improve conflict finding graph traversal (#9006)

Fix setuptools being removed due to conda run_constrains (#9014)

Avoid calling find_conflicts until all retries are spent (#9015)

refactor _conda_activate.bat in hopes of improving behavior in parallel environments (#9021)

Add support for local version specs in PYPI installed packages (#9025)

fix boto3 initialization race condition (#9037)

Fix return condition in package_cache_data (#9039)

utilize libarchive_enabled attribute provided by conda-package-handling to fall back to .tar.bz2 files only. (#9041, #9053)

Fix menu creation on windows having race condition, leading to popups about python.exe not being found (#9044)

Improve list error when egg-link leads to extra egg-infos (#9045)

Fix incorrect RemoveError when operating on an env that has one of conda's deps, but is not the env in which the current conda in use resides (#9054)

Docs

Document new package format better

Document conda init command

Document availability of RSS feed for CDN-backed channels that clone

Contributors

@Bezier89

@forrestwaters

@hajapy

@ihnorton

@matthewwardrop

@msarahan

@rogererens

@rrigdon

@soapy1

Source code(tar.gz)
Source code(zip)
4.7.10(Jul 19, 2019)
4.7.10 (2019-07-19)

Bug fixes

fix merging of specs

fix bugs in building of chains in prefix graph

Contributors:

@msarahan

Source code(tar.gz)
Source code(zip)
4.7.9(Jul 18, 2019)
Bug fixes

fix Non records in comprehension

fix potential keyerror in depth-first search

fix PackageNotFound attribute error

Contributors:

@jjhelmus

@msarahan

Source code(tar.gz)
Source code(zip)
4.7.8(Jul 17, 2019)
4.7.8 (2019-07-17)

Improvements

improve unsatisfiable messages - try to group and explain output better. Remove lots of extraneous stuff that was showing up in 4.7.7 (#8910)

preload openssl on windows to avoid library conflicts and missing library issues (#8949)

Bug fixes

fix handling of channels where more than one channel contains packages with similar name, subdir, version and build_number. This was causing mysterious unsatisfiable errors for some users. (#8938)

reverse logic check in checking channel equality, because == is not reciprocal to != with py27 (no __ne__) (#8938)

fix an infinite loop or otherwise large process with building the unsatisfiable info. Improve the depth-first search implementation. (#8941)

streamline fallback paths to unfrozen solve in case frozen fails. (#8942)

Environment activation output only shows conda activate envname now, instead of sometimes showing just activate. (#8947)

Contributors:

@forrestwaters

@jjhelmus

@katietz

@msarahan

@rrigdon

@soapy1

Source code(tar.gz)
Source code(zip)
4.7.7(Jul 13, 2019)
4.7.7 (2019-07-12)

Improvements

When an update command doesn't do anything because installed software conflicts with the update, information about the conflict is shown, rather than just saying "all requests are already satisfied" (#8899)

Bug fixes

fix missing package_type attr in finding virtual packages (#8917)

fix parallel operations of loading index to preserve channel ordering (#8921, #8922)

filter PrefixRecords out from PackageRecords when making a graph to show unsatisfiable deps. Fixes comparison error between mismatched types. (#8924)

install entry points before running post-link scripts, because post link scripts may depend on entry points. (#8925)

Contributors

@jjhelmus

@msarahan

@rrigdon

@soapy1

Source code(tar.gz)
Source code(zip)
4.7.6(Jul 11, 2019)
4.7.6 (2019-07-11)

Improvements

Improve cuda virtual package conflict messages to show the __cuda virtual package as part of the conflict (#8834)

add additional debugging info to Resolve.solve (#8895)

Bug fixes

deduplicate error messages being shown for post-link scripts. Show captured stdout/stderr on failure (#8833)

fix the checkout step in the Windows dev env setup instructions (#8827)

bail out early when implicit python pinning renders an explicit spec unsatisfiable (#8834)

handle edge cases in pinned specs better (#8843)

extract package again if url is None (#8868)

update docs regarding indexing and subdirs (#8874)

remove warning about conda-build needing an update that was bothering people (#8884)

only add repodata fn into cache key when fn is not repodata.json (#8900)

allow conda to be downgraded with an explicit spec (#8892)

add target to specs from historic specs (#8901)

improve message when solving with a repodata file before repodata.json fails (#8907)

fix distutils usage for "which" functionality. Fix inability to change python version in envs with noarch packages (#8909)

fix anaconda metapackage being removed because history matching was too restrictive (#8911)

make freezing less aggressive; add fallback to non-frozen solve (#8912)

Contributors

@forrestwaters

@jjhelmus

@mcopes73

@msarahan

@richardjgowers

@rrigdon

@soapy1

@twinssbc

Source code(tar.gz)
Source code(zip)
4.7.5(Jun 24, 2019)
4.7.5 (2019-06-24)

Improvements

improve wording in informational message when a particular *_repodata.json can't be found. No need for alarm. (#8808)

Bug fixes

restore tests being run on win-32 appveyor (#8801)

fix Dist class handling of .conda files (#8816)

fix strict channel priority handling when a package is unsatisfiable and thus not present in the collection (#8819)

handle JSONDecodeError better when package is corrupted at extract time (#8820)

Contributors

@dhirschfeld

@msarahan

@rrigdon

Source code(tar.gz)
Source code(zip)
4.7.4(Jun 19, 2019)
4.7.4 (2019-06-19)

Improvements

Revert to and improve the unsatisfiability determination from 4.7.2 that was reverted in 4.7.3. It's faster. (#8783)

Bug fixes

fix tcsh/csh init scripts (#8792)

Docs improvements

clean up docs of run_command

fix broken links

update docs environment.yaml file to update conda-package-handling

conda logo favicon

update strict channel priority info

noarch package content ported from conda-forge

add info about conda-forge

remove references to things as they were before conda 4.1. That was a long time ago. This is not a history book.

Contributors

@jjhelmus

@msarahan

@rrigdon

@soapy1

Source code(tar.gz)
Source code(zip)
4.7.3(Jun 14, 2019)
4.7.3 (2019-06-14)

Bug fixes

target prefix overrid applies to entry points in addition to replacements in standard files (#8769)

Revert to solver-based unsatisfiability determination (#8775)

fix renaming of existing prompt function in powershell (#8774)

Contributors:

@jjhelmus

@msarahan

@rrigdon

@ScottEvtuch

Source code(tar.gz)
Source code(zip)
4.7.2(Jun 11, 2019)
4.7.2 (2019-06-10)

Behavior changes

unsatisfiability is determined in a slightly different way now. It no longer uses the SAT solver, but rather determines whether any specs have no candidates at all after running through get_reduced_index. This has been faster in benchmarks, but we welcome further data from your use cases about whether this was a good change. (#8741)

when using the --only-deps flag for the install command, conda now explicitly records those specs in your history. This primarily serves to reduce conda accidentally removing packages that you have actually requested. (#8766)

Improvements

UnsatisfiableError messages are now grouped into categories and explained a bit better. (#8741)

--repodata-fn argument can be passed multiple times to have more fallback paths. repodata_fns conda config setting does the same thing, but saves you from needing to do it for every command invocation. (#8741)

Bug fixes

fix channel flip-flopping that was happening when adding a channel other than earlier ones (#8741)

refactor flow control for multiple repodata files to not use exceptions (#8741)

force conda to use only old .tar.bz2 files if conda-build <3.18.3 is installed. Conda-build breaks when inspecting file contents, and this is fixed in conda-build 3.18.3 (#8741)

use --force when using rsync to improve behavior with folders that may exist in the destination somehow. (#8750)

handle EPERM errors when renaming, because MacOS lets you remove or create files, but not rename them. Thanks Apple. (#8755)

fix conda removing packages installed via install with --only-deps flag when either update or remove commands are run. See behavior changes above. (#8766)

Contributors

@csosborn

@jjhelmus

@katietz

@msarahan

@rrigdon

Source code(tar.gz)
Source code(zip)
4.7.1(May 31, 2019)
4.7.1 (2019-05-30)

Improvements

Base initial solver specs map on explicitly requested specs (new and historic) (#8689)

Improve anonymization of automatic error reporting (#8715)

Add option to keep using .tar.bz2 files, in case new .conda isn't working for whatever reason (#8723)

Bug fixes

fix parsing hyphenated PyPI specs (change hyphens in versions to .) (#8688)

fix PrefixRecord creation when file inputs are .conda files (#8689)

fix PrefixRecord creation for pip-installed packages (#8689)

fix progress bar stopping at 75% (no extract progress with new libarchive) (#8689)

preserve pre-4.7 download() interface in conda.exports (#8698)

virtual packages (such as cuda) are represented by leading double underscores by convention, to avoid confusion with existing single underscore packages that serve other purposes (#8738)

Deprecations/Breaking Changes

The --prune flag no longer does anything. Pruning is implicitly the standard behavior now as a result of the initial solver specs coming from explicitly requested specs. Conda will remove packages that are not explicitly requested and are not required directly or indirectly by any explicitly installed package.

Docs improvements

Document removal of the free channel from defaults (#8682)

Add reference to conda config --describe (#8712)

Add a tutorial for .condarc modification (#8737)

Contributors

@alexhall

@cjmartian

@kalefranz

@martinkou

@msarahan

@rrigdon

@soapy1

Source code(tar.gz)
Source code(zip)
4.7.0(May 17, 2019)
4.7.0 (2019-05-17)

Improvements

Implement support for "virtual" CUDA packages, to make conda consider the system-installed CUDA driver and act accordingly (#8267)

Support and prefer new .conda file format where available (#8265, #8639)

Use comma-separated env names in prompt when stacking envs (#8431)

show valid choices in error messages for enums (#8602)

freeze already-installed packages when running conda install as a first attempt, to speed up the solve in existing envs. Fall back to full solve as necessary (#8260, #8626)

add optimization criterion to prefer arch over noarch packages when otherwise equivalent (#8267)

Remove free channel from defaults collection. Add restore_free_channel config parameter if you want to keep it. (#8579)

Improve unsatisfiable hints (#8638)

Add capability to use custom repodata filename, for smaller subsets of repodata (#8670)

Parallelize SubdirData readup (#8670)

Parallelize transacation verification and execution (#8670)

Bug fixes

Fix PATH handling with deactivate.d scripts (#8464)

Fix usage of deprecated collections ABCs (#)

fix tcsh/csh initialization block (#8591)

fix missing CWD display in powershell prompt (#8596)

wrap_subprocess_call: fallback to sh if no bash (#8611)

move TemporaryDirectory to avoid importing from conda.compat (#8671)

fix missing conda-package-handling dependency in dev/start (#8624)

fix path_to_url string index out of range error (#8265)

fix conda init for xonsh (#8644)

fix fish activation (#8645)

improve error handling for read-only filesystems (#8665, #8674)

break out of minimization when bisection has nowhere to go (#8672)

Handle None values for link channel name gracefully (#8680)

Contributors

@chrisburr

@EternalPhane

@jjhelmus

@kalefranz

@mbargull

@msarahan

@rrigdon

@scopatz

@seibert

@soapy1

@nehaljwani

@nh3

@teake

@yuvalreches

Source code(tar.gz)
Source code(zip)