Official Implementation of "Tracking Grow-Finish Pigs Across Large Pens Using Multiple Cameras"

Overview

Multi Camera Pig Tracking

Official Implementation of Tracking Grow-Finish Pigs Across Large Pens Using Multiple Cameras

CVPR2021 CV4Animals Workshop Poster

Dataset

The dataset can be found at this link.

The videos were acquired at the Imported Swine Research Lab (ISRL) at UIUC. The deployment video can be found here. It was annotated for grountruth global identities and bounding boxes using this MATLAB Tool.

Files

deepsort-tracking: Contains code for detecting and tracking pigs using YOLOv4 and DeepSORT

data/homography: Contains pickled homography matrices for both the pens

camera.py: Detects and tracks pigs using the trained model in DeepSORT and YOLOv4

manager.py: Main file which uses the homography matrices to assign global identities

Running the code

Download the dataset from this link and place multicam-dataset folder in data/. Note that we have already trained the model and extracted the output of DeepSORT into JSON files. You can find the pretrained checkpoint here

  1. Run export DARKNET_PATH=./deepsort-tracking/yolov4/ in terminal.
  2. Run any one of the commands from commands.txt, for instance: python3 manager.py --av data/multicam-dataset/0/0-Pen_B.mp4 --cv data/multicam-dataset/0/0-Ceiling_Cam.mp4 --cj data/multicam-dataset/0/0-Ceiling_Cam.json --aj data/multicam-dataset/0/0-Pen_B.json --cl 457

Future Work

We are currently working on building action recognition models for pig behavior using ethograms. We can currently estimate the time spent by pigs near drinkers and feeders based on their proximity.

Seg-Torch for Image Segmentation with Torch

Seg-Torch for Image Segmentation with Torch This work was sparked by my personal research on simple segmentation methods based on deep learning. It is

Eren Gölge 37 Dec 12, 2022
Learning to Estimate Hidden Motions with Global Motion Aggregation

Learning to Estimate Hidden Motions with Global Motion Aggregation (GMA) This repository contains the source code for our paper: Learning to Estimate

Shihao Jiang (Zac) 221 Dec 18, 2022
Official implementation for “Unsupervised Low-Light Image Enhancement via Histogram Equalization Prior”

HEP Unsupervised Low-Light Image Enhancement via Histogram Equalization Prior Implementation Python3 PyTorch=1.0 NVIDIA GPU+CUDA Training process The

FengZhang 34 Dec 04, 2022
A simple library that implements CLIP guided loss in PyTorch.

pytorch_clip_guided_loss: Pytorch implementation of the CLIP guided loss for Text-To-Image, Image-To-Image, or Image-To-Text generation. A simple libr

Sergei Belousov 74 Dec 26, 2022
MPI-IS Mesh Processing Library

Perceiving Systems Mesh Package This package contains core functions for manipulating meshes and visualizing them. It requires Python 3.5+ and is supp

Max Planck Institute for Intelligent Systems 494 Jan 06, 2023
PyTorch implementation of probabilistic deep forecast applied to air quality.

Probabilistic Deep Forecast PyTorch implementation of a paper, titled: Probabilistic Deep Learning to Quantify Uncertainty in Air Quality Forecasting

Abdulmajid Murad 13 Nov 16, 2022
The reference baseline of final exam for XMU machine learning course

Mini-NICO Baseline The baseline is a reference method for the final exam of machine learning course. Requirements Installation we use /python3.7 /torc

JoaquinChou 3 Dec 29, 2021
SweiNet is an uncertainty-quantifying shear wave speed (SWS) estimator for ultrasound shear wave elasticity (SWE) imaging.

SweiNet SweiNet is an uncertainty-quantifying shear wave speed (SWS) estimator for ultrasound shear wave elasticity (SWE) imaging. SweiNet takes as in

Felix Jin 3 Mar 31, 2022
SANet: A Slice-Aware Network for Pulmonary Nodule Detection

SANet: A Slice-Aware Network for Pulmonary Nodule Detection This paper (SANet) has been accepted and early accessed in IEEE TPAMI 2021. This code and

Jie Mei 39 Dec 17, 2022
An implementation of a discriminant function over a normal distribution to help classify datasets.

CS4044D Machine Learning Assignment 1 By Dev Sony, B180297CS The question, report and source code can be found here. Github Repo Solution 1 Based on t

Dev Sony 6 Nov 09, 2021
School of Artificial Intelligence at the Nanjing University (NJU)School of Artificial Intelligence at the Nanjing University (NJU)

F-Principle This is an exercise problem of the digital signal processing (DSP) course at School of Artificial Intelligence at the Nanjing University (

Thyrix 5 Nov 23, 2022
Code for Deep Single-image Portrait Image Relighting

Deep Single-Image Portrait Relighting [Project Page] Hao Zhou, Sunil Hadap, Kalyan Sunkavalli, David W. Jacobs. In ICCV, 2019 Overview Test script for

438 Jan 05, 2023
Reading list for research topics in Masked Image Modeling

awesome-MIM Reading list for research topics in Masked Image Modeling(MIM). We list the most popular methods for MIM, if I missed something, please su

ligang 231 Dec 07, 2022
This is the latest version of the PULP SDK

PULP-SDK This is the latest version of the PULP SDK, which is under active development. The previous (now legacy) version, which is no longer supporte

78 Dec 07, 2022
Deep Learning for Human Part Discovery in Images - Chainer implementation

Deep Learning for Human Part Discovery in Images - Chainer implementation NOTE: This is not official implementation. Original paper is Deep Learning f

Shintaro Shiba 63 Sep 25, 2022
Scripts and outputs related to the paper Prediction of Adverse Biological Effects of Chemicals Using Knowledge Graph Embeddings.

Knowledge Graph Embeddings and Chemical Effect Prediction, 2020. Scripts and outputs related to the paper Prediction of Adverse Biological Effects of

Knowledge Graphs at the Norwegian Institute for Water Research 1 Nov 01, 2021
Python package for dynamic system estimation of time series

PyDSE Toolset for Dynamic System Estimation for time series inspired by DSE. It is in a beta state and only includes ARMA models right now. Documentat

Blue Yonder GmbH 40 Oct 07, 2022
Statistical-Rethinking-with-Python-and-PyMC3 - Python/PyMC3 port of the examples in " Statistical Rethinking A Bayesian Course with Examples in R and Stan" by Richard McElreath

Statistical Rethinking with Python and PyMC3 This repository has been deprecated in favour of this one, please check that repository for updates, for

Osvaldo Martin 786 Dec 29, 2022
Using contrastive learning and OpenAI's CLIP to find good embeddings for images with lossy transformations

The official code for the paper "Inverse Problems Leveraging Pre-trained Contrastive Representations" (to appear in NeurIPS 2021).

Sriram Ravula 26 Dec 10, 2022
A Gura parser implementation for Python

Gura Python parser This repository contains the implementation of a Gura (compliant with version 1.0.0) format parser in Python. Installation pip inst

Gura Config Lang 19 Jan 25, 2022