An open-source Deep Learning Engine for Healthcare that aims to treat & prevent major diseases

Overview

AlphaCare

AlphaCare

Background

AlphaCare is a work-in-progress, open-source Deep Learning Engine for Healthcare that aims to treat and prevent major diseases. The goal is to eventually target the root cause of all disease, aging. We'll be building new features every week as a community and in the process, learn about all the potential ways that Deep Learning can be used in Healthcare.

Coding Challenge (Due Date: October 7, 2021 at 12 PM PST)

Use DeepMind's Perceiver IO model to classify any type of Medical Image (CT scans, Brain Scans, etc.). You can use the alphacare notebook in the computer vision folder as a starting point, labeled "perceiver". Submit your code to this link and post a classified image example on your favorite social network with the hashtag #AlphaCare. I'll announce the winner in 2 weeks, and we'll integrate their code into this repository. AlphaCare will become more and more multi-purpose as we continually add capabilities to it.

Submission Link

Dependencies

  • keras
  • tensorflow
  • pywt (pip install PyWavelets)
  • scipy
  • sklearn
  • matplotlib
  • csv
  • numpy
  • pandas
  • os
  • itertools
  • collections

Use pip install to install each dependency.

example:

pip install scipy

Instructions

After installing each dependency, go to the Computer Vision folder and open the notebook titled AlphaCare_Notebook_v1 via jupyter notebook or upload it to google colab. The Dataset used is theMIT BIH dataset.

TODOs (Pull requests are encouraged

  • Computer Vision Notebook for ECG Classification
  • Integrate notebook into Flask web app (in progress)
  • Visualize each ECG signal in real-time
  • Add NLP module for Electronic Health Record interpretation
  • Chatbot for Diagnostic Recommendations
  • Data Generation for improved accuracy in text, image, and numeric classification
  • Add Reinforcement Learning engine for real-time predictions on biometric data streams
  • Add Patient privacy preservation functionality via Ethereum Blockchain
  • Add Quantum Machine Learning use case
  • Create Integration pre processing file to allow end to end prediction using any type of data

Credits

The credits for this code go to Yomnahesham, Keshav Boudaria, and MIT for their dataset. More credits will be added as we integrate more open source repositories into our code base.

Owner
Siraj Raval
subscribe to my youtube channel! www.youtube.com/c/sirajraval
Siraj Raval
COD-Rank-Localize-and-Segment (CVPR2021)

COD-Rank-Localize-and-Segment (CVPR2021) Simultaneously Localize, Segment and Rank the Camouflaged Objects Full camouflage fixation training dataset i

JingZhang 52 Dec 20, 2022
Unified Instance and Knowledge Alignment Pretraining for Aspect-based Sentiment Analysis

Unified Instance and Knowledge Alignment Pretraining for Aspect-based Sentiment Analysis Requirements python 3.7 pytorch-gpu 1.7 numpy 1.19.4 pytorch_

12 Oct 29, 2022
The Rich Get Richer: Disparate Impact of Semi-Supervised Learning

The Rich Get Richer: Disparate Impact of Semi-Supervised Learning Preprocess file of the dataset used in implicit sub-populations: (Demographic groups

<a href=[email protected]"> 4 Oct 14, 2022
Official implementation of our paper "Learning to Bootstrap for Combating Label Noise"

Learning to Bootstrap for Combating Label Noise This repo is the official implementation of our paper "Learning to Bootstrap for Combating Label Noise

21 Apr 09, 2022
An Exact Solver for Semi-supervised Minimum Sum-of-Squares Clustering

PC-SOS-SDP: an Exact Solver for Semi-supervised Minimum Sum-of-Squares Clustering PC-SOS-SDP is an exact algorithm based on the branch-and-bound techn

Antonio M. Sudoso 1 Nov 13, 2022
PyTorch implementation of Algorithm 1 of "On the Anatomy of MCMC-Based Maximum Likelihood Learning of Energy-Based Models"

Code for On the Anatomy of MCMC-Based Maximum Likelihood Learning of Energy-Based Models This repository will reproduce the main results from our pape

Mitch Hill 32 Nov 25, 2022
基于Pytorch实现优秀的自然图像分割框架!(包括FCN、U-Net和Deeplab)

语义分割学习实验-基于VOC数据集 usage: 下载VOC数据集,将JPEGImages SegmentationClass两个文件夹放入到data文件夹下。 终端切换到目标目录,运行python train.py -h查看训练 (torch) Li Xiang 28 Dec 21, 2022

Image Captioning using CNN ,LSTM and Attention

Image Captioning using CNN ,LSTM and Attention This is a deeplearning model which tries to summarize an image into a text . Installation Install this

ASUTOSH GHANTO 1 Dec 16, 2021
Optimal Adaptive Allocation using Deep Reinforcement Learning in a Dose-Response Study

Optimal Adaptive Allocation using Deep Reinforcement Learning in a Dose-Response Study Supplementary Materials for Kentaro Matsuura, Junya Honda, Imad

Kentaro Matsuura 4 Nov 01, 2022
[ICLR2021] Unlearnable Examples: Making Personal Data Unexploitable

Unlearnable Examples Code for ICLR2021 Spotlight Paper "Unlearnable Examples: Making Personal Data Unexploitable " by Hanxun Huang, Xingjun Ma, Sarah

Hanxun Huang 98 Dec 07, 2022
HMLLDB is a collection of LLDB commands to assist in the debugging of iOS apps.

HMLLDB is a collection of LLDB commands to assist in the debugging of iOS apps. 中文介绍 Features Non-intrusive. Your iOS project does not need to be modi

mao2020 47 Oct 22, 2022
Use of Attention Gates in a Convolutional Neural Network / Medical Image Classification and Segmentation

Attention Gated Networks (Image Classification & Segmentation) Pytorch implementation of attention gates used in U-Net and VGG-16 models. The framewor

Ozan Oktay 1.6k Dec 30, 2022
Personal implementation of paper "Approximate Nearest Neighbor Negative Contrastive Learning for Dense Text Retrieval"

Approximate Nearest Neighbor Negative Contrastive Learning for Dense Text Retrieval This repo provides personal implementation of paper Approximate Ne

John 8 Oct 07, 2022
PyTorch implementation of UPFlow (unsupervised optical flow learning)

UPFlow: Upsampling Pyramid for Unsupervised Optical Flow Learning By Kunming Luo, Chuan Wang, Shuaicheng Liu, Haoqiang Fan, Jue Wang, Jian Sun Megvii

kunming luo 87 Dec 20, 2022
A Python framework for developing parallelized Computational Fluid Dynamics software to solve the hyperbolic 2D Euler equations on distributed, multi-block structured grids.

pyHype: Computational Fluid Dynamics in Python pyHype is a Python framework for developing parallelized Computational Fluid Dynamics software to solve

Mohamed Khalil 21 Nov 22, 2022
WHENet: Real-time Fine-Grained Estimation for Wide Range Head Pose

WHENet: Real-time Fine-Grained Estimation for Wide Range Head Pose Yijun Zhou and James Gregson - BMVC2020 Abstract: We present an end-to-end head-pos

368 Dec 26, 2022
render sprites into your desktop environment as shaped windows using GTK

spritegtk render static or animated sprites into your desktop environment as dynamic shaped windows using GTK requires pycairo and PYGobject: pip inst

hermit 20 Oct 27, 2022
StarGANv2-VC: A Diverse, Unsupervised, Non-parallel Framework for Natural-Sounding Voice Conversion

StarGANv2-VC: A Diverse, Unsupervised, Non-parallel Framework for Natural-Sounding Voice Conversion Yinghao Aaron Li, Ali Zare, Nima Mesgarani We pres

Aaron (Yinghao) Li 282 Jan 01, 2023
Randstad Artificial Intelligence Challenge (powered by VGEN). Soluzione proposta da Stefano Fiorucci (anakin87) - primo classificato

Randstad Artificial Intelligence Challenge (powered by VGEN) Soluzione proposta da Stefano Fiorucci (anakin87) - primo classificato Struttura director

Stefano Fiorucci 1 Nov 13, 2021
Segmentation Training Pipeline

Segmentation Training Pipeline This package is a part of Musket ML framework. Reasons to use Segmentation Pipeline Segmentation Pipeline was developed

Musket ML 52 Dec 12, 2022