Improving Query Representations for DenseRetrieval with Pseudo Relevance Feedback:A Reproducibility Study.

Related tags

Deep LearningAPR
Overview

APR

The repo for the paper Improving Query Representations for DenseRetrieval with Pseudo Relevance Feedback:A Reproducibility Study.

Environment setup

To reproduce the results in the paper, we rely on two open-source IR toolkits: Pyserini and tevatron.

We cloned, merged, and modified the two toolkits in this repo and will use them to train and inference the PRF models. We refer to the original github repos to setup the environment:

Install Pyserini: https://github.com/castorini/pyserini/blob/master/docs/installation.md.

Install tevatron: https://github.com/texttron/tevatron#installation.

You also need MS MARCO passage ranking dataset, including the collection and queries. We refer to the official github repo for downloading the data.

To reproduce ANCE-PRF inference results with the original model checkpoint

The code, dataset, and model for reproducing the ANCE-PRF results presented in the original paper:

HongChien Yu, Chenyan Xiong, Jamie Callan. Improving Query Representations for Dense Retrieval with Pseudo Relevance Feedback

have been merged into Pyserini source. Simply just need to follow this instruction, which includes the instructions of downloading the dataset, model checkpoint (provided by the original authors), dense index, and PRF inference.

To train dense retriever PRF models

We use tevatron to train the dense retriever PRF query encodes that we investigated in the paper.

First, you need to have train queries run files to build hard negative training set for each DR.

You can use Pyserini to generate run files for ANCE, TCT-ColBERTv2 and DistilBERT KD TASB by changing the query set flag --topics to queries.train.tsv.

Once you have the run file, cd to /tevatron and run:

python make_train_from_ranking.py \
	--ranking_file /path/to/train/run \
	--model_type (ANCE or TCT or DistilBERT) \
	--output /path/to/save/hard/negative

Apart from the hard negative training set, you also need the original DR query encoder model checkpoints to initial the model weights. You can download them from Huggingface modelhub: ance, tct_colbert-v2-hnp-msmarco, distilbert-dot-tas_b-b256-msmarco. Please use the same name as the link in Huggingface modelhub for each of the folders that contain the model.

After you generated the hard negative training set and downloaded all the models, you can kick off the training for DR-PRF query encoders by:

python -m torch.distributed.launch \
    --nproc_per_node=2 \
    -m tevatron.driver.train \
    --output_dir /path/to/save/mdoel/checkpoints \
    --model_name_or_path /path/to/model/folder \
    --do_train \
    --save_steps 5000 \
    --train_dir /path/to/hard/negative \
    --fp16 \
    --per_device_train_batch_size 32 \
    --learning_rate 1e-6 \
    --num_train_epochs 10 \
    --train_n_passages 21 \
    --q_max_len 512 \
    --dataloader_num_workers 10 \
    --warmup_steps 5000 \
    --add_pooler

To inference dense retriever PRF models

Install Pyserini by following the instructions within pyserini/README.md

Then run:

python -m pyserini.dsearch --topics /path/to/query/tsv/file \
    --index /path/to/index \
    --encoder /path/to/encoder \ # This encoder is for first round retrieval
    --batch-size 64 \
    --output /path/to/output/run/file \
    --prf-method tctv2-prf \
    --threads 12 \
    --sparse-index msmarco-passage \
    --prf-encoder /path/to/encoder \ # This encoder is for PRF query generation
    --prf-depth 3

An example would be:

python -m pyserini.dsearch --topics ./data/msmarco-test2020-queries.tsv \
    --index ./dindex-msmarco-passage-tct_colbert-v2-hnp-bf \
    --encoder ./tct_colbert_v2_hnp \
    --batch-size 64 \
    --output ./runs/tctv2-prf3.res \
    --prf-method tctv2-prf \
    --threads 12 \
    --sparse-index msmarco-passage \
    --prf-encoder ./tct-colbert-v2-prf3/checkpoint-10000 \
    --prf-depth 3

Or one can use pre-built index and models available in Pyserini:

python -m pyserini.dsearch --topics dl19-passage \
    --index msmarco-passage-tct_colbert-v2-hnp-bf \
    --encoder castorini/tct_colbert-v2-hnp-msmarco \
    --batch-size 64 \
    --output ./runs/tctv2-prf3.res \
    --prf-method tctv2-prf \
    --threads 12 \
    --sparse-index msmarco-passage \
    --prf-encoder ./tct-colbert-v2-prf3/checkpoint-10000 \
    --prf-depth 3

The PRF depth --prf-depth 3 depends on the PRF encoder trained, if trained with PRF 3, here only can use PRF 3.

Where --topics can be: TREC DL 2019 Passage: dl19-passage TREC DL 2020 Passage: dl20 MS MARCO Passage V1: msmarco-passage-dev-subset

--encoder can be: ANCE: castorini/ance-msmarco-passage TCT-ColBERT V2 HN+: castorini/tct_colbert-v2-hnp-msmarco DistilBERT Balanced: sebastian-hofstaetter/distilbert-dot-tas_b-b256-msmarco

--index can be: ANCE index with MS MARCO V1 passage collection: msmarco-passage-ance-bf TCT-ColBERT V2 HN+ index with MS MARCO V1 passage collection: msmarco-passage-tct_colbert-v2-hnp-bf DistillBERT Balanced index with MS MARCO V1 passage collection: msmarco-passage-distilbert-dot-tas_b-b256-bf

To evaluate the run:

TREC DL 2019

python -m pyserini.eval.trec_eval -c -m ndcg_cut.10 -m recall.1000 -l 2 dl19-passage ./runs/tctv2-prf3.res

TREC DL 2020

python -m pyserini.eval.trec_eval -c -m ndcg_cut.10 -m recall.1000 -l 2 dl20-passage ./runs/tctv2-prf3.res

MS MARCO Passage Ranking V1

python -m pyserini.eval.msmarco_passage_eval msmarco-passage-dev-subset ./runs/tctv2-prf3.res
Owner
ielab
The Information Engineering Lab
ielab
DSL for matching Python ASTs

py-ast-rule-engine This library provides a DSL (domain-specific language) to match a pattern inside a Python AST (abstract syntax tree). The library i

1 Dec 18, 2021
Probabilistic Entity Representation Model for Reasoning over Knowledge Graphs

Implementation for the paper: Probabilistic Entity Representation Model for Reasoning over Knowledge Graphs, Nurendra Choudhary, Nikhil Rao, Sumeet Ka

Nurendra Choudhary 8 Nov 15, 2022
An executor that performs image segmentation on fashion items

ClothingSegmenter U2NET fashion image/clothing segmenter based on https://github.com/levindabhi/cloth-segmentation Overview The ClothingSegmenter exec

Jina AI 5 Mar 30, 2022
A Python training and inference implementation of Yolov5 helmet detection in Jetson Xavier nx and Jetson nano

yolov5-helmet-detection-python A Python implementation of Yolov5 to detect head or helmet in the wild in Jetson Xavier nx and Jetson nano. In Jetson X

12 Dec 05, 2022
The official PyTorch implementation of the paper: *Xili Dai, Xiaojun Yuan, Haigang Gong, Yi Ma. "Fully Convolutional Line Parsing." *.

F-Clip — Fully Convolutional Line Parsing This repository contains the official PyTorch implementation of the paper: *Xili Dai, Xiaojun Yuan, Haigang

Xili Dai 115 Dec 28, 2022
PyTorch original implementation of Cross-lingual Language Model Pretraining.

XLM NEW: Added XLM-R model. PyTorch original implementation of Cross-lingual Language Model Pretraining. Includes: Monolingual language model pretrain

Facebook Research 2.7k Dec 27, 2022
🛰️ Awesome Satellite Imagery Datasets

Awesome Satellite Imagery Datasets List of aerial and satellite imagery datasets with annotations for computer vision and deep learning. Newest datase

Christoph Rieke 3k Jan 03, 2023
Code for "OctField: Hierarchical Implicit Functions for 3D Modeling (NeurIPS 2021)"

OctField(Jittor): Hierarchical Implicit Functions for 3D Modeling Introduction This repository is code release for OctField: Hierarchical Implicit Fun

55 Dec 08, 2022
Predict and time series avocado hass

RECOMMENDER SYSTEM MARKETING TỔNG QUAN VỀ HỆ THỐNG DỮ LIỆU 1. Giới thiệu - Tiki là một hệ sinh thái thương mại "all in one", trong đó có tiki.vn, là

hieulmsc 3 Jan 10, 2022
Registration Loss Learning for Deep Probabilistic Point Set Registration

RLLReg This repository contains a Pytorch implementation of the point set registration method RLLReg. Details about the method can be found in the 3DV

Felix Järemo Lawin 35 Nov 02, 2022
Framework for estimating the structures and parameters of Bayesian networks (DAGs) at per-sample resolution

Sample-specific Bayesian Networks A framework for estimating the structures and parameters of Bayesian networks (DAGs) at per-sample or per-patient re

Caleb Ellington 1 Sep 23, 2022
Model Agnostic Interpretability for Multiple Instance Learning

MIL Model Agnostic Interpretability This repo contains the code for "Model Agnostic Interpretability for Multiple Instance Learning". Overview Executa

Joe Early 10 Dec 17, 2022
An implementation demo of the ICLR 2021 paper Neural Attention Distillation: Erasing Backdoor Triggers from Deep Neural Networks in PyTorch.

Neural Attention Distillation This is an implementation demo of the ICLR 2021 paper Neural Attention Distillation: Erasing Backdoor Triggers from Deep

Yige-Li 84 Jan 04, 2023
Only valid pull requests will be allowed. Use python only and readme changes will not be accepted.

❌ This repo is excluded from hacktoberfest This repo is for python beginners and contains lot of beginner python projects for practice. You can also s

Prajjwal Pathak 50 Dec 28, 2022
A library for finding knowledge neurons in pretrained transformer models.

knowledge-neurons An open source repository replicating the 2021 paper Knowledge Neurons in Pretrained Transformers by Dai et al., and extending the t

EleutherAI 96 Dec 21, 2022
This repo contains the code for paper Inverse Weighted Survival Games

Inverse-Weighted-Survival-Games This repo contains the code for paper Inverse Weighted Survival Games instructions general loss function (--lfn) can b

3 Jan 12, 2022
Geometric Deep Learning Extension Library for PyTorch

Documentation | Paper | Colab Notebooks | External Resources | OGB Examples PyTorch Geometric (PyG) is a geometric deep learning extension library for

Matthias Fey 16.5k Jan 08, 2023
Revisiting Oxford and Paris: Large-Scale Image Retrieval Benchmarking

Revisiting Oxford and Paris: Large-Scale Image Retrieval Benchmarking We revisit and address issues with Oxford 5k and Paris 6k image retrieval benchm

Filip Radenovic 188 Dec 17, 2022
The code for the NeurIPS 2021 paper "A Unified View of cGANs with and without Classifiers".

Energy-based Conditional Generative Adversarial Network (ECGAN) This is the code for the NeurIPS 2021 paper "A Unified View of cGANs with and without

sianchen 22 May 28, 2022
Pytorch implementation of "Training a 85.4% Top-1 Accuracy Vision Transformer with 56M Parameters on ImageNet"

Token Labeling: Training an 85.4% Top-1 Accuracy Vision Transformer with 56M Parameters on ImageNet (arxiv) This is a Pytorch implementation of our te

蒋子航 383 Dec 27, 2022