Python module for drawing and rendering beautiful atoms and molecules using Blender.

Overview

Beautiful Atoms

Batoms is a Python package for editing and rendering atoms and molecules objects using blender. A Python interface that allows for automating workflows.

Features:

  • Model: space-filling, ball-stick, polyhedral, cavity and so on.
  • Supported File type: cif, xyz, cube, pdb, json, VASP-out and so on.
  • Supported structure: ASE and Pymatgen
  • Volumetric data (Isosurface)
  • Animation
  • GUI
  • Flexible: Python script, run interactively or in background.
  • High quality rendering: 3D models
  • Free, Open Source: Easy to download and install.
  • Cross-platform: (Linux, Windows, macOS)

Author

Dependencies

  • Python
  • Blender
  • ASE
  • Scikit-image

How to use

Please vist: https://beautiful-atoms.readthedocs.io/en/latest/

You might also like...
Collection of scripts for making high quality beautiful math-related posters.
Collection of scripts for making high quality beautiful math-related posters.

Poster Collection of scripts for making high quality beautiful math-related posters. The poster can have as large printing size as 3x2 square feet wit

I'm doing Genuary, an aritifiacilly generated month to build code that make beautiful things
I'm doing Genuary, an aritifiacilly generated month to build code that make beautiful things

Genuary 2022 I'm doing Genuary, an aritifiacilly generated month to build code that make beautiful things. Every day there is a new prompt for making

๐Ÿ—พ Streamlit Component for rendering kepler.gl maps
๐Ÿ—พ Streamlit Component for rendering kepler.gl maps

streamlit-keplergl ๐Ÿ—พ Streamlit Component for rendering kepler.gl maps in a streamlit app. ๐ŸŽˆ Live Demo ๐ŸŽˆ Installation pip install streamlit-keplergl

Make scripted visualizations in blender
Make scripted visualizations in blender

Scripted visualizations in blender The goal of this project is to script 3D scientific visualizations using blender. To achieve this, we aim to bring

Blender addon that creates a temporary window of any type from the 3D View.

CreateTempWindow2.8 Blender addon that creates a temporary window of any type from the 3D View. Features Can the following window types: 3D View Graph

Data-FX is an addon for Blender (2.9) that allows for the visualization of data with different charts
Data-FX is an addon for Blender (2.9) that allows for the visualization of data with different charts

Data-FX Data-FX is an addon for Blender (2.9) that allows for the visualization of data with different charts Currently, there are only 2 chart option

Missing data visualization module for Python.
Missing data visualization module for Python.

missingno Messy datasets? Missing values? missingno provides a small toolset of flexible and easy-to-use missing data visualizations and utilities tha

Missing data visualization module for Python.
Missing data visualization module for Python.

missingno Messy datasets? Missing values? missingno provides a small toolset of flexible and easy-to-use missing data visualizations and utilities tha

IPython/Jupyter notebook module for Vega and Vega-Lite
IPython/Jupyter notebook module for Vega and Vega-Lite

IPython Vega IPython/Jupyter notebook module for Vega 5, and Vega-Lite 4. Notebooks with embedded visualizations can be viewed on GitHub and nbviewer.

Releases(v2.0.0)
Functions for easily making publication-quality figures with matplotlib.

Data-viz utils ๐Ÿ“ˆ Functions for data visualization in matplotlib ๐Ÿ“š API Can be installed using pip install dvu and then imported with import dvu. You

Chandan Singh 16 Sep 15, 2022
2D maze path solver visualizer implemented with python

2D maze path solver visualizer implemented with python

SS 14 Dec 21, 2022
Matplotlib JOTA style for making figures

Matplotlib JOTA style for making figures This repo has Matplotlib JOTA style to format plots and figures for publications and presentation.

JOTA JORNALISMO 2 May 05, 2022
Graphical visualizer for spectralyze by Lauchmelder23

spectralyze visualizer Graphical visualizer for spectralyze by Lauchmelder23 Install Install matplotlib and ffmpeg. Put ffmpeg.exe in same folder as v

Matthew 1 Dec 21, 2021
๐Ÿ“Š๐Ÿ“ˆ Serves up Pandas dataframes via the Django REST Framework for use in client-side (i.e. d3.js) visualizations and offline analysis (e.g. Excel)

๐Ÿ“Š๐Ÿ“ˆ Serves up Pandas dataframes via the Django REST Framework for use in client-side (i.e. d3.js) visualizations and offline analysis (e.g. Excel)

wq framework 1.2k Jan 01, 2023
A central task in drug discovery is searching, screening, and organizing large chemical databases

A central task in drug discovery is searching, screening, and organizing large chemical databases. Here, we implement clustering on molecular similarity. We support multiple methods to provide a inte

NVIDIA Corporation 124 Jan 07, 2023
A library for bridging Python and HTML/Javascript (via Svelte) for creating interactive visualizations

A library for bridging Python and HTML/Javascript (via Svelte) for creating interactive visualizations

Anthropic 98 Dec 27, 2022
Interactive Dashboard for Visualizing OSM Data Change

Dashboard and intuitive data downloader for more interactive experience with interpreting osm change data.

1 Feb 20, 2022
Designed a greedy algorithm based on Markov sequential decision-making process in MATLAB/Python to optimize using Gurobi solver

Designed a greedy algorithm based on Markov sequential decision-making process in MATLAB/Python to optimize using Gurobi solver, the wheel size, gear shifting sequence by modeling drivetrain constrai

Sabbella Prasanna 1 Jan 11, 2022
A small script written in Python3 that generates a visual representation of the Mandelbrot set.

Mandelbrot Set Generator A small script written in Python3 that generates a visual representation of the Mandelbrot set. Abstract The colors in the ou

1 Dec 28, 2021
China and India Population and GDP Visualization

China and India Population and GDP Visualization Historical Population Comparison between India and China This graph shows the population data of Indi

Nicolas De Mello 10 Oct 27, 2021
Param: Make your Python code clearer and more reliable by declaring Parameters

Param Param is a library providing Parameters: Python attributes extended to have features such as type and range checking, dynamically generated valu

HoloViz 304 Jan 07, 2023
A deceptively simple plotting library for Streamlit

๐Ÿ… Plost A deceptively simple plotting library for Streamlit. Because you've been writing plots wrong all this time. Getting started pip install plost

Thiago Teixeira 192 Dec 29, 2022
Data visualization electromagnetic spectrum

Datenvisualisierung-Elektromagnetischen-Spektrum Anhand des Moduls matplotlib sollen die Daten des elektromagnetischen Spektrums dargestellt werden. D

Pulsar 1 Sep 01, 2022
Define fortify and autoplot functions to allow ggplot2 to handle some popular R packages.

ggfortify This package offers fortify and autoplot functions to allow automatic ggplot2 to visualize statistical result of popular R packages. Check o

Sinhrks 504 Dec 23, 2022
By default, networkx has problems with drawing self-loops in graphs.

By default, networkx has problems with drawing self-loops in graphs. It makes it hard to draw a graph with self-loops or to make a nicely looking chord diagram. This repository provides some code to

Vladimir Shitov 5 Jan 06, 2022
A shimmer pre-load component for Plotly Dash

dash-loading-shimmer A shimmer pre-load component for Plotly Dash Installation Get it with pip: pip install dash-loading-extras Or maybe you prefer Pi

Lucas Durand 4 Oct 12, 2022
Automate the case review on legal case documents and find the most critical cases using network analysis

Automation on Legal Court Cases Review This project is to automate the case review on legal case documents and find the most critical cases using netw

Yi Yin 7 Dec 28, 2022
Generate visualizations of GitHub user and repository statistics using GitHub Actions.

GitHub Stats Visualization Generate visualizations of GitHub user and repository statistics using GitHub Actions. This project is currently a work-in-

JoelImgu 3 Dec 14, 2022